Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2269 ATGTCACTCTTCGATGGAGCTTTCATGAACACGCAACTCTCGAAGCACACTTCAATCTTCGGTCTCCGTCTCTGGGTTGTGATCGGAATCCTCATCGGAGTTTTCATCGTATTCACTCTCTTCCTCCTCTCTCTCTGCCTCGTCTCTCGCCGGCAGAGCCGGCGCTCCGGCGCAGGCGACTACAAGGTCGCCGGAGACCCTGATGTGTCAAAGGAAATCCACACGATTGTGCACCTTCCCGGACCCCACATGCTCCTGCCACCTGCGCCGGCGAAGGTGCCGGAGATCCACGTGGACATGGGGAAGACGGAGCACAGGGTGGTGGTGCAGTGTGATCGGGTTTCAAGTGAAGAGAGTAAAGGAACGGTGGGTAGTGGGTGTGAAACGACGTCGTCCTTTGGGAGTGTTAGTGTTGGTGGGATTGGACCTGAAGTTTCACATCTTGGGTGGGGAAGATGGTACACTCTGAGAGAACTTGAAGATGCCACAGGTGGGTTGCGTCCTGAAAATGTGATTGGCGAAGGTGGCTATGGTATTGTTTATCAAGGTCTCCTCACTGATGGTACCAAAGTTGCTGTTAAGAATCTCCTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTGCGACACAAAAATCTTGTTAGGTTGCTTGGTTACTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTAGACAATGGCAATCTAGAACAATGGTTGCATGGAGATGTTGGAGCTGTAAGCCCTCTGACGTGGAATATACGCATGAACATTATATTGGGAACAGCCAGAGGATTGGCGTATCTTCATGAGGGTCTTGAACCCAAAGTTGTCCACCGCGATGTGAAATCAAGCAATATACTACTTGATCGCCAATGGAACTCCAAGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATATTTATAGCTTTGGAATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTGATAGATTGGTTGAAGACTATGGTTGGGAATCGAAAATCTGAGGAAGTAGTTGATCCTAAGCTACCTGAGATGCCATCTTCTAAGGCTCTTAAACGTGCTCTATTAATTGCTCTCCGGTGTGTTGATCCTGATGCAACAAAAAGGCCAAAAATGGGACAAGTGATCCACATGCTTGAGGCAGATGACCTGTTATTCCATACTGAATCCAGAACTGGGGGAGAGTCATCCCGTTCTCATCATGATTATCAACAAGACCATAAGGACTCAAATTTAGATAAGAGAACAGATGGAGGGATCGTTGATCAAAGTGAAGATGGTAGTTTTAGAAACCATCATCAGCCCACTAGATGGAGATGA 1494 0.4672 MSLFDGAFMNTQLSKHTSIFGLRLWVVIGILIGVFIVFTLFLLSLCLVSRRQSRRSGAGDYKVAGDPDVSKEIHTIVHLPGPHMLLPPAPAKVPEIHVDMGKTEHRVVVQCDRVSSEESKGTVGSGCETTSSFGSVSVGGIGPEVSHLGWGRWYTLRELEDATGGLRPENVIGEGGYGIVYQGLLTDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWNIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKSEEVVDPKLPEMPSSKALKRALLIALRCVDPDATKRPKMGQVIHMLEADDLLFHTESRTGGESSRSHHDYQQDHKDSNLDKRTDGGIVDQSEDGSFRNHHQPTRWR* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2269 497 Pfam Protein kinase domain 169 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2269 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Apr4g2269 497 SUPERFAMILY Protein kinase-like (PK-like) 145 438 IPR011009 -
Apr4g2269 497 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Apr4g2269 497 Gene3D Transferase(Phosphotransferase) domain 1 242 450 - -
Apr4g2269 497 SMART serkin_6 166 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2269 497 PANTHER OS01G0323000 PROTEIN 1 488 - -
Apr4g2269 497 MobiDBLite consensus disorder prediction 448 491 - -
Apr4g2269 497 ProSiteProfiles Protein kinase domain profile. 166 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2269 497 CDD STKc_IRAK 172 438 - -
Apr4g2269 497 Gene3D Phosphorylase Kinase; domain 1 149 241 - -
Apr4g2269 497 MobiDBLite consensus disorder prediction 448 497 - -
Apr4g2269 497 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2269 Apr-Chr4 31745862 31749537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2269 107 438 Receptor kinase-like Gene Family AT4G02010 44.345 2.76e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr4g2269 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2269 - - gmx:100817295 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2269 4 31745862 31749537 Apr10g1300 10 25330648 25334516 PCT