Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2257 ATGGGTTTTCCCGTAGGGTACCCGGAAGTGATTGTCCCGCGCGTGTTTCTCCACCTCGTGACCCTCTTGGCCTTTCTCCGCTCCCTTGTCTCCTCCCTCTTCCGCCTCCTTCGACTCTCCGACCTCCTCGACACCGACGTCGCCGCAGCCTCATGGCCGGAGACCCACGCGCCGCGGCCTCACGCGCCCACACTCTCGGCGCTGCTCATCAGGGAGTTCCTCCCCGTGGCGACGTACGGCGTCGTGGCCGGAGATTCCCCGGCGGCGGCGTGCGCGGTGTGTCTGAGTGAGTTTTGGGCGGAGGAAGAAATAAGATGTATGGCGAATTGCAAGCACATTTTCCACCGAGCGTGTGTGGACCGTTGGATCGATCACGATCAGAAAACGTGTCCTCTTTGTAGAACTCCGTTTGTGCCTCATCATAAGGTCCATGACTATAACCAACGCCTTTGGGCTGCTTCTGGTGTTTCTCACTTCTACGAAGATGATTACACTGCTTCCTTCTGA 507 0.5838 MGFPVGYPEVIVPRVFLHLVTLLAFLRSLVSSLFRLLRLSDLLDTDVAAASWPETHAPRPHAPTLSALLIREFLPVATYGVVAGDSPAAACAVCLSEFWAEEEIRCMANCKHIFHRACVDRWIDHDQKTCPLCRTPFVPHHKVHDYNQRLWAASGVSHFYEDDYTASF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2257 168 Pfam Ring finger domain 90 134 IPR001841 -
Apr4g2257 168 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 165 - -
Apr4g2257 168 ProSiteProfiles Zinc finger RING-type profile. 91 134 IPR001841 -
Apr4g2257 168 SUPERFAMILY RING/U-box 90 148 - -
Apr4g2257 168 SMART ring_2 91 133 IPR001841 -
Apr4g2257 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 143 IPR013083 -
Apr4g2257 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2257 Apr-Chr4 31601851 31602415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2257 1 155 C3H Transcription Factor Family AT1G63840 42.949 5.52e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2257 K16281 - gmx:100813224 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2257 4 31601851 31602415 Apr10g1311 10 25432996 25433662 PCT