LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr4g2242	ATGGATAAAGACGAAGCTCTACAAATTCCCAGAAGATTGACCAGATCTTCAGCCTCATCTTCTGCATCTACATCAAATAGTGCAGCTGCAGCAAAAGTAAACAATAGCCTTGAGCCCCTAACAGTTAATGACCTTTTAGTTGGAGGAGATCCCATCAGCCTAGATTCTATAATTTCTAGCTTTCCTGGTAGAAGTAACCAGATTCTTGAGATTTTGCGTCTTTTGGGACCTCTGAATTCACCAATGCTTCCTTTATTTGTGTATGGCGGTTCTTCCACTGGAAAATCAAGCATAATTCTTCAATTATTCAGGCATCTCAACCGGCCTCTTGTTTATTCTAGTTGCAGGACATGTTATAACCAACGTATCTTGTTCGAATCTATTCTAAATCAGTTACTTCTACATAGGAAAAATGCTTCCAATGGTTATTCAAATGCAAAGCGCTGTGAAAGACCATCTGATTTTATCAATTTTCTTCGGGAAGCATTCACCAATATTATAAACAATATGAAGGAGAAATCAGAGAAGTTGATCTCAAATAAGATGACACAAGGGGGAATTGGAAATATGATCTACTTGGTATTTGATAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGTTCTACTATATTGCCTTTACTGTTTAATCTTTATGATCTACTAAAGATGCCTGAGGTGGGTCTAATTTTTATCAGTACTACTTCCCCGGATACCTTTTATACTAACATGGGTTATGTGGAGCCCATCCCCATTTACTTTCCTGATTACACAGAAGGAGATATTCGTCAAATATTATTGAGAAACCAAGCAAACCAGAAGCTGTATTCTTCATTTTTGGATGTTGCTCTGAGGCCTTTCTGTAGAATTTCTGGGCAGGTTGGTGATTTGTCTACTGCCTTAAAGCCTCTATATGAAAAATATTGTGAGCCTTTAAGTGATAAGGGAGTTGTGCCTAATGAAGAGATGAAGCGAAGGCTGTTCAGTCATATCAAGCCTCATATTGCGTCCTCTTTGAATGAGATATTTAAGGTTTCATCTATTCCTTCAACTGAAGTTGAGATCCGTAAAGAGAAAAAGCGGAAGGAGAATCCCAAGAGTTTGGAGCAATTTGAAGAAATTGGCAATCTAGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTGATTTCAGCATTTCTTGCCTCTAGAAACCCAGCTACTCTTGATGCTTCACTGTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGTAAGAGGAAGCCCTCTGAGAAAGTGCTGGAACAGAAGGAAAGTTTAGAAGAGGAACTACTGATGAAAGGACCTGGAACTTTCCCATTGGAAAGGTTGTTAGCCATATTTCAATGTATTGTATCAGTTGCAGAAGAGCCATCCGATGAGGAGGAACTAAATGATGGATTAGGAGTTCAAGGTGGAAATGGTGGACTGATGTCCGATGTTCTTTTGCAGCTATCCAGTCTTTGCAATGCTAACTTTATATTCAAAGGACGAAGCTGCCCAATTGAAGGCACAACTCGGTATCGATCGACCATATCTGAAGACCTGGCTTTGAAGGTTGCAAGGAGCCTCAAGTTCCCGTTATCAAAGTATTTGTATAGAAGATAG	1623	0.3913	MDKDEALQIPRRLTRSSASSSASTSNSAAAAKVNNSLEPLTVNDLLVGGDPISLDSIISSFPGRSNQILEILRLLGPLNSPMLPLFVYGGSSTGKSSIILQLFRHLNRPLVYSSCRTCYNQRILFESILNQLLLHRKNASNGYSNAKRCERPSDFINFLREAFTNIINNMKEKSEKLISNKMTQGGIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDLLKMPEVGLIFISTTSPDTFYTNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLYSSFLDVALRPFCRISGQVGDLSTALKPLYEKYCEPLSDKGVVPNEEMKRRLFSHIKPHIASSLNEIFKVSSIPSTEVEIRKEKKRKENPKSLEQFEEIGNLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKVLEQKESLEEELLMKGPGTFPLERLLAIFQCIVSVAEEPSDEEELNDGLGVQGGNGGLMSDVLLQLSSLCNANFIFKGRSCPIEGTTRYRSTISEDLALKVARSLKFPLSKYLYRR*	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr4g2242	540	Pfam	Origin recognition complex (ORC) subunit 5 C-terminus	251	537	IPR020796	GO:0000808\|GO:0005634\|GO:0006260
	Apr4g2242	540	MobiDBLite	consensus disorder prediction	1	25	-	-
	Apr4g2242	540	MobiDBLite	consensus disorder prediction	404	426	-	-
	Apr4g2242	540	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	56	275	IPR027417	-
	Apr4g2242	540	Pfam	AAA ATPase domain	61	223	IPR041664	-
	Apr4g2242	540	PANTHER	ORIGIN RECOGNITION COMPLEX SUBUNIT 5	53	539	IPR020796	GO:0000808\|GO:0005634\|GO:0006260
	Apr4g2242	540	MobiDBLite	consensus disorder prediction	409	426	-	-
	Apr4g2242	540	Gene3D	-	61	242	IPR027417	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr4g2242	3	540	Core DNA Replication Machinery Family	AT4G29910	58.519	0.0	649

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr4g2242	K02607		-	gmx:100784340	871.307