Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2212 ATGAACATGGATATGGCTTGTAGTTTGCCGCAGTCAAGAATGTTACACGGAGGTGTGGGGACGAATTATAGACACAGATCAGCTGGTCAGTTAGTTCATTTTGATTTTAGAAGGAGAGGTTTTGGTTGTGCATTTCTTGGCAACTCAAGAATTGTTTCAAGATTGAGTATCAGTGGGATGAGCAAAGTTGGTGGTGTATCTACTTGTTGGAATAATTCAAGAGTCATTTCTGGTGGGGAGTTTAAAGTTTTGAATATGAAGAGCAGTTTGTCTTGTAAGAATAATAATAATCTTTTCATGGGATCTAGAGTAATTTGGTCAAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTAATGGAAATGGCCGGAATGTTGATTATGCAGCAGAAGGTTCGGGTGAGGATGCAGGATCAGGCCCCATCCCTAATGCTGAACTGGATGCACCTTCAGAAGAAGGGCAAGCAGGGAAGAAAGGAAGCAGTGAAGTAGCACTAGAGGAACAAAGTGTAGATGAACTGAAAGAACTATTGCAAAAGGCCTTGAAAGAGCTAGAAGTTGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACAGCCATTTTTTTGCATGATGAAGCAGTAAATTCTTGGAACAGTGTTAATTCTACCCTTGACAGTCTCCAAGAAATAGCGAATGAAGAACTTTTGGCCAAAGAAGCTGTCCAAAGTGCAACAATGGCTTTTTCATTAGCTGAGGCAAGGCTTCAAGTAGCTATAGAATCTTTGGAGGCTGCAAAAGAAATTCCTGATTCAGTGCAAGATTCTAATGAGAGCAATGGTGATAAGGACACAACAGAAGAGGAGAAAGCTATTCTGTTTGCTCAAGAAGACATGAAGGCATGCCAGGCTAATTTAGCCAATTGTGAGGCAGAGCTGAAGCGCTTGCAAAATAAAAAGGAGGAGTTGCAGAAGGAACTTAGCAATCTGCAAGAAATTGCGGAAAAGGCTCAGCTGAATGCAGTGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAACGTGTAAATGATACAGAGATTGCCTTACAGCGAGCAGATAAGTCTATTTCTAATTCAAATGCTGATACCATAGAAACTATACAAGCACAGGATGTTGTGGTTGTTCCTGAGGAGGAGAAAGATGTTCAAGGTTCTTCCGGAGATGTCACTGTTGAAAGGCACAGGGATTTGGCAATTGATGATGAATCTTTGCTTGCCAAGTTATCACCTGAAACACTATCTGATAAGACCAGCCAAATTTCAGAAGACAAAACACAGTCTGGTTATTTAAGTGACAACGAGAGTGCTGTTCAAACAAAAAAGCAGGAAACTCAGAAAGATTTGACCAGAGATAGTTCTCCCAAGTCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTTTACTGAAGATGGTGCTGAGTTCACACCAGCAGCAGTTTTCCAGGGCCTTGTGTTATCTGTACAGAAGCAGTTGCCCAAGCTAATATTTGGGCTACTGTTAATGGGAGCAGGGGTTGCCTTGTATGCCAATAGAGCATATAAGAATTCTCAACTGCTTCCGCAGGCAGATGTAATTGTGACGAGTGTCGAAGAAGTTTCCTCTAGTGCAAAACCTCTGGTTAGGAAACTTCATAAGCTCCCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCATCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCCGCTGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCATGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCTGTGGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTATAGCTGTTGGCTTGGTGGCTCATTATTTTTGTGGCCTATCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTGTCATCAACTGCCGTTGTTCTACAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGACGAGCTACATTTTCTGTTTTACTTTTTCAGGATCTGGCTGTTGTGGTTTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCTCTTGGACTGGCTGGGGTTAAGGCAGCAGTGGCCATCACTGCCATAATTGCAGGTGGACGGTTGTTGCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCTGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAAGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTGTTGGGGCTCTTCTTTATGACGGTTGGAATGTCTATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTCATCACAGGGACTCTAGGGCTCTTAATATGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATTTTTGGAATTTCTCTCATTTCTGCCATAAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCATCTTTGCTGTTTCTTGTTGTGGGAATTTCAATGGCCATCACACCGTGGCTAGCTGTAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGATGTTAGAAGTTTATTACCCATAGAAAGTGAGACCGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTCGGCCAGATCATTGCCCAACTTCTTTCTGAGCGACTTATTCCATTTGTTGCACTGGATGTAAGAAGTGATAGAGTGGCTGTTGGGCGAGCCCTAGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTACTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACTCTGGATACGCCCGGTGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTCCGTGCCCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTAGCTCAGGCTAAACTCCCCACATCAGAGATTGCAGCAACTATAAATGAATTCAGATCCCGACATCTGGCTGAGCTCACGGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGTCATAATAGAATTATGAGCAAACCCAAATCTCAATCCCCGGATACTTCAGATGAGACCCAAGTTTCTGAAGGGACACTCGCAATGTGA 3612 0.4266 MNMDMACSLPQSRMLHGGVGTNYRHRSAGQLVHFDFRRRGFGCAFLGNSRIVSRLSISGMSKVGGVSTCWNNSRVISGGEFKVLNMKSSLSCKNNNNLFMGSRVIWSKCQGNDSLAYVNGNGRNVDYAAEGSGEDAGSGPIPNAELDAPSEEGQAGKKGSSEVALEEQSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAVNSWNSVNSTLDSLQEIANEELLAKEAVQSATMAFSLAEARLQVAIESLEAAKEIPDSVQDSNESNGDKDTTEEEKAILFAQEDMKACQANLANCEAELKRLQNKKEELQKELSNLQEIAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATQRVNDTEIALQRADKSISNSNADTIETIQAQDVVVVPEEEKDVQGSSGDVTVERHRDLAIDDESLLAKLSPETLSDKTSQISEDKTQSGYLSDNESAVQTKKQETQKDLTRDSSPKSLLKKSSRFFSASFFSFTEDGAEFTPAAVFQGLVLSVQKQLPKLIFGLLLMGAGVALYANRAYKNSQLLPQADVIVTSVEEVSSSAKPLVRKLHKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAIAVGLVAHYFCGLSGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAGVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLICGKTILVSLMGRIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLVVGISMAITPWLAVGGQLIASRFEQHDVRSLLPIESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGHNRIMSKPKSQSPDTSDETQVSEGTLAM* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2212 1203 Pfam TrkA-N domain 1008 1121 IPR003148 GO:0006813
Apr4g2212 1203 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3 1203 - -
Apr4g2212 1203 MobiDBLite consensus disorder prediction 464 479 - -
Apr4g2212 1203 Gene3D - 595 981 IPR038770 -
Apr4g2212 1203 MobiDBLite consensus disorder prediction 1176 1203 - -
Apr4g2212 1203 MobiDBLite consensus disorder prediction 128 164 - -
Apr4g2212 1203 MobiDBLite consensus disorder prediction 440 463 - -
Apr4g2212 1203 MobiDBLite consensus disorder prediction 1180 1203 - -
Apr4g2212 1203 Pfam Sodium/hydrogen exchanger family 605 975 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr4g2212 1203 Gene3D - 1003 1167 - -
Apr4g2212 1203 Coils Coil 163 190 - -
Apr4g2212 1203 ProSiteProfiles RCK N-terminal domain profile. 1007 1129 IPR003148 GO:0006813
Apr4g2212 1203 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 1203 - -
Apr4g2212 1203 Coils Coil 290 345 - -
Apr4g2212 1203 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 606 886 IPR004771 GO:0006812|GO:0008324|GO:0016021
Apr4g2212 1203 MobiDBLite consensus disorder prediction 440 479 - -
Apr4g2212 1203 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1004 1145 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2212 Apr-Chr4 31146660 31160725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2212 3 1203 Inorganic Solute Cotransporters AT4G00630 65.753 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2212 - - gmx:100818163 1904.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2212 4 31146660 31160725 Apr4g2212 4 31146660 31160725 ECH
Apr4g2212 4 31146660 31160725 Apr10g1358 10 25888664 25900402 PCT