Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2193 ATGGCGAGTCCAGAAGAAGCCAAGGTTGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGCGGAGCTACGGGGTTGCAAGATCAAGTGCTGTGATTCCAGAAAAGGGTTTGGCATATTTTCTGATAAAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGAATGTAGAGCAATGTTTGAAGAAGGAGATGTTGATGACAGGTTATTAATGATGCTGTTACTGGTTGTGGAGCGTTTGCGTAAGAATTCTCTGTGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTGGAAATCCACTTTGGTTTACTGATGATGAACTTCAAGAGCTAAGAGGAACACCATTATATCGTGCAACTGAATTGCAGAAGAAAAGCCTGCTTTCTTTGTATGAAACTAAAGTGAAGGATTTAGTGAAGAAGCTTTTGACTCTTGATGGAAATTCAGAGATTGAGGTGAGCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGAGCCGCGCTTTGAACATTCCAATGCCTCGTTCTTATGTGTTTCCAGAAATTCCAGAAGTTCATGACAGTCACATTCCAGAAGCTGATGAAAAAAGAAGACAGGTTAAAAAATCTGACAATGTAACCAGGGAAATGGCATGTAACACAGTGCAAGGAGACAATGTTTGGGTAGAGGGTCTTGTCCCTGGAATTGACTTTTGTAACCATGATCTGAAGCCAATAGCAACTTGGGAAGTTGATGGAACTGGTTTAACAACAGGAGTTCCTTTCTCCATGTATCTTCTTTCTGCTGCTCAAAGTCCCTTGCAGATTGATCAAGAAATTTCCATTTGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTGTATGGTTTCGTTGTTGATGATAGCACAGATGACTATCTCATGGTCCACTATCCACCGGAAGCAATTAATGCTATTTCCTTTTCAGAGTCCAAAAGCCAGCTTCTTGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCCAAAACTTTGCTGGATCATGGATTTTTTCCAATAGGCACCCAAAACAGTGGAGATAAAAACAAGTGCAAGGTTGACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAAACACCATCTTATGTAAACAAGCTGGTATTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAACTTTTCAAGGTTTCTTCAATGCTCAAAGAGCTTGTTGGACCTGAAGGGGATAGACAACTATCAGATACAGATGTCCAATCAGCAGTGTGGGAGGTCTGCGGTGATTCCGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAAATGATGGAGCTTGAAGAGAGTTCCGGAACAGAGGAAAGTGATCTTGGTTTACTAAAGAAGGCCCTTATTATTGATAGCCAAGAAGATAGCAAGCAGTACATGAGCAATTTAAGCATAAAGGGAAATGAATCAGAGGAATCAAAGTTCATGACTAGAAACAAGAAGTGTGCTATAGTATATCGGCGAGGCCAAAAGCAGCTAACTCGGCTATTCTTGAAAGAAGCAGAACATGCACTACAGTTATCACTGAACGAAGAAGAGGTGATTATTCTTGATTAA 1680 0.4095 MASPEEAKVETFMQWLQANGAELRGCKIKCCDSRKGFGIFSDKDVSDGVMLVVPLDLAITPMRVLQDPLLGPECRAMFEEGDVDDRLLMMLLLVVERLRKNSLWKPYLDMLPTTFGNPLWFTDDELQELRGTPLYRATELQKKSLLSLYETKVKDLVKKLLTLDGNSEIEVSFEDFLWANSVFWSRALNIPMPRSYVFPEIPEVHDSHIPEADEKRRQVKKSDNVTREMACNTVQGDNVWVEGLVPGIDFCNHDLKPIATWEVDGTGLTTGVPFSMYLLSAAQSPLQIDQEISICYGNKGNEELLYLYGFVVDDSTDDYLMVHYPPEAINAISFSESKSQLLEVQKAEMRCLLPKTLLDHGFFPIGTQNSGDKNKCKVDQVCNYSWSGQRKTPSYVNKLVFPEKFMTTLRTIAMQEDELFKVSSMLKELVGPEGDRQLSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMELEESSGTEESDLGLLKKALIIDSQEDSKQYMSNLSIKGNESEESKFMTRNKKCAIVYRRGQKQLTRLFLKEAEHALQLSLNEEEVIILD* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2193 559 CDD SET_LSMT 32 311 - -
Apr4g2193 559 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 553 - -
Apr4g2193 559 SUPERFAMILY SET domain 8 315 IPR046341 -
Apr4g2193 559 Pfam SET domain 36 297 IPR001214 GO:0005515
Apr4g2193 559 Gene3D set domain protein methyltransferase, domain 1 5 311 - -
Apr4g2193 559 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 553 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr4g2193 SET 2.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2193 - - gmx:100777394 946.806