Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2185 ATGGTGGAAGATGGTGACGAGGTTGCACTTGATGCACGTTCTGCTGAAGAGTGGTTGTTATGTGCACAGGAACTTGTTCCTATGGCCCTTGATAAGGCAAGAGTGGTTAAGGGCTTCCCTGGTAGATGGAAGATGATAATTTCGAAATTGGAACAGATCCCGTTGCATCTATCGGACTTGTCAAGCCATCCGTGCTTCTCAAAGAATGCTCTTTGCAAGGAGCAGTTACAGGCTGTGTCGAAGACACTCAGAGAAGCAAATGAATTGGCTGAGTTGTGTTTGAAGGAGAAGTACGAGGGTAAGCTTCGGATGCAAAGTGATCTTGATGCGTTAATTGGGAAACTTGATTTGAATTTAAGGGATTGTGGGCTTTTGATCAAGACTGGTGTGCTTGGTGAGGCTACTTTACCAATGGCTGTGTCTAGTTCAGTGGTGGAATCAGATGTTGCAACACACAACAACATAAGGGAATTGCTGGCACGCCTTCAGATCGGGCACTTGGAGGCAAAGCACAGAGCTTTGGACAGCGTGGTTGAAGCCATGAAAGAAGATGAAAAGAATGTTTTAGCTGTTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAGTTGCTCACAGCTACCTCTCCCAGGATAAGAGAGAAGACAGTAACAGTTATATGCTCGCTAGCAGAATCGGGGAGCTGCGAGAATTGGCTAGTTTCTGAAGGCGTTCTTCCACCTCTTATAAGGCTTGTGGAATCAGGCAGTGCCGTGGGGAAAGAAAAGGCGACAATATCCCTTCAGAGGTTGTCCATGTCAGCAGAAACAGCACGAACAATGGTGGGACACAGCGGGGTTCGTCCTTTGGTTGAGCTTTGTCAAACTGGTGATTCTGTGTCGCAGGCCGCAGCTGCATGTACTCTGAAGAACATATCAGCTGTTCCTGAGGTGAGACAAGCTTTGGCAGAAGAAGGGGTTGTGAGGGTGATGATCAATTTGCTTAACTGTGGAATCCTCTTAGGTTCCAAAGAGTATGCAGCAGAGTGCTTACAGAACCTCACTGCAAGCAATGAGAATCTAAGGAAGAATGTTATATCAGAAGGTGGTGTTAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCCGCAGTTGGAGCATTGAGGAATTTGGTTGGATCAGTTGCTGAAGAAACCTTGATTTCCCTTGGCCTAATTCCCCGATTGGTTCATGTGTTAAAGTCCGGATCCTTAGGCGCTCAGCAAGCTGCCATGGGAGCAATATGCCGAGTTTGCAGCTCGACTGAGATGAAGAAACTGGTTGGTGAAGCTGGATGCATCCCTCTGCTTGTGAAAATGCTTGAGGCTAAGTCAAACAGTGCTAGAGAGGTTGCTGCTCAAGCAATTGCAAGCTTAATGATTGTGTCTCAGAACCGTAGAGAAGTTCAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCGCAGAACACTGCTAAGAAATATGCAGTTTCTTGCCTTGGATCACTTTCTTCAAGTAAGAAGTGTAAGAAGCTAATGATCTCATATGGGGCAATTGGGTATCTCAAGAAACTCACTGAGATGGAGATTCCAGGAGCTAAGAAGTTACATGAGAGGTTGGAGAGAGGGAAATTGAGAAGTTTGTTTAGCAAGAAATAG 1680 0.4589 MVEDGDEVALDARSAEEWLLCAQELVPMALDKARVVKGFPGRWKMIISKLEQIPLHLSDLSSHPCFSKNALCKEQLQAVSKTLREANELAELCLKEKYEGKLRMQSDLDALIGKLDLNLRDCGLLIKTGVLGEATLPMAVSSSVVESDVATHNNIRELLARLQIGHLEAKHRALDSVVEAMKEDEKNVLAVLGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARTMVGHSGVRPLVELCQTGDSVSQAAAACTLKNISAVPEVRQALAEEGVVRVMINLLNCGILLGSKEYAAECLQNLTASNENLRKNVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVAEETLISLGLIPRLVHVLKSGSLGAQQAAMGAICRVCSSTEMKKLVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLMIVSQNRREVQKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKLMISYGAIGYLKKLTEMEIPGAKKLHERLERGKLRSLFSKK* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2185 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 559 - -
Apr4g2185 559 Gene3D - 333 542 IPR011989 -
Apr4g2185 559 Gene3D - 146 332 IPR011989 -
Apr4g2185 559 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 559 - -
Apr4g2185 559 Pfam Armadillo/beta-catenin-like repeat 430 467 IPR000225 GO:0005515
Apr4g2185 559 Pfam Armadillo/beta-catenin-like repeat 271 306 IPR000225 GO:0005515
Apr4g2185 559 SUPERFAMILY ARM repeat 155 537 IPR016024 -
Apr4g2185 559 SMART arm_5 389 428 IPR000225 GO:0005515
Apr4g2185 559 SMART arm_5 184 224 IPR000225 GO:0005515
Apr4g2185 559 SMART arm_5 307 348 IPR000225 GO:0005515
Apr4g2185 559 SMART arm_5 471 512 IPR000225 GO:0005515
Apr4g2185 559 SMART arm_5 429 469 IPR000225 GO:0005515
Apr4g2185 559 SMART arm_5 349 388 IPR000225 GO:0005515
Apr4g2185 559 SMART arm_5 266 306 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2185 Apr-Chr4 30968298 30972073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2185 205 478 U-box Gene Family AT3G54790 27.240 1.96e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2185 - - gmx:100781453 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2185 4 30968298 30972073 Apr4g2185 4 30968298 30972073 ECH