Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2174 ATGAATATGATGCGAAGGTTGAAGAGCATTGCTTCTGGGAGGACTTCGATTTCATCAGATCCTGGAGGGGATTGTACCACAAAGAGAGCCAAAGTTGATCAGGAGACTGAAGGAAAGGTCAACGAGGAAACATATCCTATGGAGAGAGGTGGAAAAGATCAGGAGCAGAATATAGATGCATCAAAAGAAACTGCTGTTGGCACAGTTAATTCCAATGTTTCTACAGTGGCTAGAATTGAGAAGTCGGGTTATGATCAGCTTCCAAAAGAATTACGTGAAATGAAAATTGTAGATGACAAAGGGAAAAACAACAATGAGAAGGATATGGATGCAGCTGTCGTGAATGGTAATGGAACAGAGACGGGTCAAATAATTACAACTGCTATTGGTGGTCGAGATGGACAACCAAAGAGGACAATCTCATACATGGCAGAACGTGTGGTTGGTACTGGATCTTTTGGTGTTGTTTATCAGGCCAAGTGCCTTGAAACTGGTGAAGCAGTTGCGATAAAGAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGTCTGCTTGACCATACTAACGTTCTCAGACTAAAGCACTGTTTCTATTCAGCAGCTGATAAAGATGAATTGTACCTTAACCTGGTTTTGGAGTACGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTACATCAGGATGCACCAACATATGCCTATCCTTTATGTGCAACTGTATACATACCAGATATGTCGTGGATTAAATTATTTGCATCATGTGATTGGAGTCTGTCATCGAGACATCAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCCAACATATCGTATATATGCTCACGGTATTATAGAGCTCCAGAACTTATATTTGGTGCAACGGAATACACAACTGCTATTGATGTTTGGTCTGCTGGTTGTGTTTTGGCTGAGCTTCTTCTAGGACAGCCAATGTTTCCTGGGGAGAGTGGGGTTGATCAGTTGGTAGAGATCATCAAGATCTTAGGAACGCCAACTAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCACAAGGTTTTTCACAAAAAGATGCCTTCAGAAGCAGTGGATCTTGTGTCAAGGATGCTTCAGTATTCACCAAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCCTTCTTTGATGATCTGCGAGACCCAAATGCATGCTTACCGAATGGTCGAGCACTGCCTTCTTTGTTTGATTTCACTGCTCAAGAGCTGGCAGGTGCACCTGAGGAGTTGCGTCGGCGACTCATTCCTGAGCATGCAAGTTGA 1413 0.4253 MNMMRRLKSIASGRTSISSDPGGDCTTKRAKVDQETEGKVNEETYPMERGGKDQEQNIDASKETAVGTVNSNVSTVARIEKSGYDQLPKELREMKIVDDKGKNNNEKDMDAAVVNGNGTETGQIITTAIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRLLDHTNVLRLKHCFYSAADKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPILYVQLYTYQICRGLNYLHHVIGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLRDPNACLPNGRALPSLFDFTAQELAGAPEELRRRLIPEHAS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2174 470 Gene3D Phosphorylase Kinase; domain 1 127 221 - -
Apr4g2174 470 ProSitePatterns Protein kinases ATP-binding region signature. 148 172 IPR017441 GO:0005524
Apr4g2174 470 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 469 - -
Apr4g2174 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Apr4g2174 470 PANTHER SHAGGY-LIKE KINASE 6 469 - -
Apr4g2174 470 Gene3D Transferase(Phosphotransferase) domain 1 222 470 - -
Apr4g2174 470 CDD STKc_GSK3 137 429 IPR039192 -
Apr4g2174 470 Pfam Protein kinase domain 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2174 470 MobiDBLite consensus disorder prediction 26 56 - -
Apr4g2174 470 MobiDBLite consensus disorder prediction 1 56 - -
Apr4g2174 470 SMART serkin_6 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2174 470 SUPERFAMILY Protein kinase-like (PK-like) 141 451 IPR011009 -
Apr4g2174 470 MobiDBLite consensus disorder prediction 9 23 - -
Apr4g2174 470 ProSiteProfiles Protein kinase domain profile. 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2174 Apr-Chr4 30812139 30817621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2174 148 435 Core Cell Cycle Gene Families AT1G76540 35.017 2.84e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Apr4g2174 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2174 K00924 - gmx:100786458 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2174 4 30812139 30817621 Apr4g2174 4 30812139 30817621 ECH