Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2162 ATGAATCTTATTCCTTACAATGTTTATTACTTCCTTTATTCATCATCCCTTCGTCCATTTGGTTGGTTTATAGGATATACTGTGATGCCGGCTCTGAGAAGTCATGGATATGCCTTGGCTGTTTCGTTTTGTTTTATCATCTTCATAGCAGCCTCACAAAGAACAGACCCTACAGAAGTTGATGCACTGATACACATCAAGAAAAGTTTGATTGATCCCAAGGACAATCTGAAGAGCTGGAATAAGGGTGATCCATGTGCATCAGACTGGACAGGAGTATGGTGTTTTGATAAGAAGGGTGCTGATGGATATTTCCATGTTCGTGAGATCTACTTAATGACAATGAATCTCTCGGGAACTCTAGCACCACAGCTTGGTCAGCTATCCCATCTTGAGATACTGGATTTCATGTGGAACAATCTGACAGGATCAATACCAAAGGAGATTGGAAATATTACGGCATTGAGACTCTTGCTCCTGAATGGGAATAAGTTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTAAAAATTTGAATAGACTCCAATTAGACGAAAATCAATTATCCGGTCCTATACCGGAGTCATTTGCTAACTTGATCAATGTCAAACACCTTCATATGAACAACAACTCTTTTAATGGTCAACTTCCATCCAAACTTTCTAAGCTACCCAACCTTATGCACCTGCTTGTGGACAACAATAACTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACATGGGTTGGCAATACTCCAACTTGATAACAATAATTTCAGCGGGAGTGGAATTCCTTCTACCTATGCAAACTTATCAAGGCTAGTAAAACTAAGTCTAAGAAACTGCAGTCTGCAAGGTGCTGTTCCTGATTTCAGTTCAATACCCAAGCTTAGCTATTTAGATCTTAGCTGGAATCAGTTCACTGGACAATTACCATCAAAGAAACTGGCAGACAATATGACAACTATTGATCTGTCCAATAATCGCCTGAATGGATCTATTCCTCAAAGCTTCTCATATCCTCATCTCCAGAACTTGTCACTTGAGAACAATTTACTGTCTGGGCACATCCCTTCTAGCATATGGCAGAACATGTCCTTCAGTGAGAAAGCTAAACTTACAATTGATCTCCATAACAACTCATTTTTGGATGTCTTGGGAAATTTGAAGCCCCCAAAAAATGTTACCTTGAGGCTTTCTGGCAATCCTATCTGCAAGAATTCTAGCGTGCAAGGAATTCGTCAATATTGTGGACCTGAAGGAGGTGAAGCAACTCAAGACTCAACAAACTCAAAACCTAGCTGTCAAGTTCAATCTTGTCCAACGGATAACTTTTATGAATATGCTCCCTCTTCTCCAGTTCCTTGCTTTTGTGCAGCACCTTTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATCAAACTAGTTTTGAAAACTATATTACTGAGTCCTTAAACTTAGACCTTTATCAACTTTCAATAGATTCAGTTGCTTGGGAAGAAGGACCTCGTCTCAGAATGTATTTAAAACTTTTCCCTGCCTACAATGATTCAAATTCTAACATGTTCAATACTAGTGAGGTTCGTCGCATTAAAGGCTTGTTCACATCATGGCAATTTGCTCGCAATGATCTTTTTGGACCATATGAGCTCATGAACTTCACTCTTCTTGGACCTTATGCAAATTTAATTATTGATTCGGGGAAGAGAAAAACTAGTGTGGGCATAATAGTTGCCGCAACAATAGCAGCTGCTGCCTGTGTTTTATCAATATCTGCAATAATCATTCTTCTGATTTCTAGAAGACATTGGAAATACCAGCACAAGATTTCCAGGAAGCGAATGTCCTCTAATATATCTATCAAAATAGATGGCATGAAAGTGTTTACTTTCAAAGAATTGGCTCATGCTAGCAACAAATTTAATATCTCAACTAAAGTTGGCCAAGGAGGTTATGGCAATGTTTATAAAGGCATTTTATCTGATCAAACATTTGTGGCCATTAAGCGAGCAGAAGAAGGTTCCTTACAAGGGCAAAAAGAGTTTTTGACCGAGATTGAGCTTTTATCAAGGTTACACCATCGGAATCTTGTCTCACTGATTGGATACTGTAATGAAGAAGGGGAGCAGATGTTGGTTTATGAATTCATGCCCAATGGCACCTTAAGGGACTGGATTTCTGGTAAAAGAAAAAAAACCAAGGATGGCCTAAATTTTGGCATGAGGTTGAGAATTGCAATGGGTGCAGCCAAAGGCATACTTTATCTGCATACAGAAGCTAACCCTCCTATATTCCACCGAGATATTAAAGCCAGTAACATTCTTTTGGACTCCAAGTTTACAGCTAAAGTGGCAGATTTTGGATTGTCACGGCTTGTACCATACTTAGATGAAGAAGGAACTGCTCCAAAATATGTGTCAACAGTTGTGAAGGGAACACCAGGTTACCTGGACCCAGAATATTTGTTGACTCATAAGTTGACTGATAAATGTGATGTCTATAGCTTAGGAATTGTGTTTTTGGAGCTTTTGACGGGCATGCAACCTATATCACATGGCAAAAACATTGTCCGTGAGGTTAATGTGGCATATCAATCTGGGCAGATATATTCCATCATAGACAACAGTATGGGTTTTTATTCATCTGATTGCTTGGAAAAGTTTTTAACACTAGCCCTTAGTTGTTGCCAAGACAATCCAGAAGAAAGACCATCAATGCTAGATGTGGTCAGGGAATTAGAAGATATCATTGCAATGTTGCCTGAAAGTGAAACTAGTTTCTCTGATGTTACCTTGGATAGTTCTGGTAAAATGGCACCTTCATCATCATCATCAACATCAGGATCCCATGTGATAAGAGAAGAACAACACATGTCCTCATATGTGTCAGGAAGTGATCTTGTTAGTGATGTCACTCCCACCATTGTTCCTCGTTGA 2961 0.3931 MNLIPYNVYYFLYSSSLRPFGWFIGYTVMPALRSHGYALAVSFCFIIFIAASQRTDPTEVDALIHIKKSLIDPKDNLKSWNKGDPCASDWTGVWCFDKKGADGYFHVREIYLMTMNLSGTLAPQLGQLSHLEILDFMWNNLTGSIPKEIGNITALRLLLLNGNKLSGSLPDELGNLKNLNRLQLDENQLSGPIPESFANLINVKHLHMNNNSFNGQLPSKLSKLPNLMHLLVDNNNLSGYLPPEFSMLHGLAILQLDNNNFSGSGIPSTYANLSRLVKLSLRNCSLQGAVPDFSSIPKLSYLDLSWNQFTGQLPSKKLADNMTTIDLSNNRLNGSIPQSFSYPHLQNLSLENNLLSGHIPSSIWQNMSFSEKAKLTIDLHNNSFLDVLGNLKPPKNVTLRLSGNPICKNSSVQGIRQYCGPEGGEATQDSTNSKPSCQVQSCPTDNFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFPPYQTSFENYITESLNLDLYQLSIDSVAWEEGPRLRMYLKLFPAYNDSNSNMFNTSEVRRIKGLFTSWQFARNDLFGPYELMNFTLLGPYANLIIDSGKRKTSVGIIVAATIAAAACVLSISAIIILLISRRHWKYQHKISRKRMSSNISIKIDGMKVFTFKELAHASNKFNISTKVGQGGYGNVYKGILSDQTFVAIKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLRDWISGKRKKTKDGLNFGMRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPYLDEEGTAPKYVSTVVKGTPGYLDPEYLLTHKLTDKCDVYSLGIVFLELLTGMQPISHGKNIVREVNVAYQSGQIYSIIDNSMGFYSSDCLEKFLTLALSCCQDNPEERPSMLDVVRELEDIIAMLPESETSFSDVTLDSSGKMAPSSSSSTSGSHVIREEQHMSSYVSGSDLVSDVTPTIVPR* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2162 986 Pfam Protein kinase domain 650 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2162 986 SUPERFAMILY Protein kinase-like (PK-like) 629 921 IPR011009 -
Apr4g2162 986 Gene3D Ribonuclease Inhibitor 222 292 IPR032675 -
Apr4g2162 986 Pfam Leucine rich repeat N-terminal domain 57 95 IPR013210 -
Apr4g2162 986 CDD STKc_IRAK 655 924 - -
Apr4g2162 986 SMART serkin_6 649 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2162 986 Gene3D Phosphorylase Kinase; domain 1 619 724 - -
Apr4g2162 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 39 956 - -
Apr4g2162 986 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 39 956 - -
Apr4g2162 986 SUPERFAMILY L domain-like 73 414 - -
Apr4g2162 986 ProSiteProfiles Protein kinase domain profile. 649 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2162 986 MobiDBLite consensus disorder prediction 938 959 - -
Apr4g2162 986 Gene3D Transferase(Phosphotransferase) domain 1 725 939 - -
Apr4g2162 986 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Apr4g2162 986 Gene3D Ribonuclease Inhibitor 293 443 IPR032675 -
Apr4g2162 986 Gene3D Ribonuclease Inhibitor 56 220 IPR032675 -
Apr4g2162 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2162 Apr-Chr4 30714764 30725485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2162 33 933 Receptor kinase-like Gene Family AT5G01950 62.099 0.0 1120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Apr4g2162 Pkinase 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2162 - - gmx:100815005 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2162 4 30714764 30725485 Apr4g2162 4 30714764 30725485 ECH