Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2157 ATGATGCTACAGTCCGACATTGCCACAATATCAATTTTCCTAATCCTGCTTGTGTTTCCTCAAACTATAGCTGATCTACATTCAGAAAAACAAGCGCTCCTTGATTTTGCTGCTGCAGTTCATCATGGTCCAAAAGTAAATTGGAACTCTAGTACCTCAATTTGCACTTCTTGGGTGGGAGTTACGTGCAATCATGATGGCACTCATGTGCTTTCTGTGAGGCTTCCAGGTGTTGGGCTGCGTGGTTCTCTCCCTCCAAATACACTTGGTAAGCTAAATGGACTCGTTAGTCTTAGTCTTAGGTCCAACAGCTTGAATGGAAACCTCCCAATTGACATACTTTCTCTTCCTTCGATTCGATTTATATATTTACAACATAACAACTTCTCAGGTGATATTCCTGAGTTTCTGCTACCAAGGCTTATGATTCTTGATTTGTCCTATAACTCTTTCACAGGACAGATTCCAGCCTCAATCCAAAACTTGACATATCTAATAGGACTTAGCCTCCAAAACAACTCTCTTAGAGGATCTATTCCTGGTGTTAACCTTCCTAACCTTAAGAATTTGGATTTGAGCTTCAACTACCTAAATGGTTCAATTCCTTCTTGTCTTCATAAGTTTCCTGCCTCCTCATTTAGAGGGAATTTGATGTTATGTGGAGCACCTTTGAAACAATGTTCTTTGGTTTCCCTTAATACCACATTGTCTCCACCAATAGTCTCCAAAAAACCAAGTGATCTATCAAACAGGAAGCTAAGTACAGGTGCAAAAATTGCAATTGCTTTGGGGGGTTTCACAATGATGTTTCTTCCAGCTCTTATAGTAGTGTTCTGCTGTTTCAAGAAAAAAGTTGGTGCACAAAATGTAGCACCTACAGAGAAGGGTGGAAAGCTTAAGGAGGATTTTGGGAGTGGTGTGCAAGAACATGAGAAAAACAGGCTAATATTTTTTGAAGGTTGTTCTTACAATTTTGATCTTGAGGACTTGTTAAGAGCTTCAGCTGAAGTGCTTGGGAAGGGAAGTTTTGGAACAACATATAAAGCCATCTTGGAGGAGGGAACTACAGTGGTTGTGAAGAGGTTAAAAGAAGTGGCAGTGGGTAAAAAAGAATTTGAACAGCAAATGGAGATTGTCCAAAGACTTGATCATCATCCAAATCTTATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAGCTAATGGTTTATGACTACTCAAGTACCGGCAGCTTTTCCAAGTCGTTGCATGGAACAAGGGAAACAGGACGAACTCCACTGGATTGGGATTCAAGATTGAAGATCATGGTTGGAGCTGCCAGGGGCATTGCTCATATCCACTCAGCTAATGGAAGGAAATTTGTCCATGGCAATATAAAATCATCTAATGTGCTTCTCTCAATAGATTTTCAAGGATGCATATCAGATTTTGGCCTAACTCCTTTAACAAATTTCTGTGCCTCCCCAAGAAGTCCAGGCTACAGAGCACCTGAAGCTATTGAAACACGAAAATCCACGCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGACACGATGATGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGATATCCAAACATTGAAGAAGAACTTGTGCAGATGTTGCAACTGGCAATGGCATGCGTGGCAGAGATGCCTGACACGAGACCTTCAATGGAGGAAGTTGCAAGGACAATTGAAGAAATTGGAGCATTTATTTCTTAA 1824 0.4084 MMLQSDIATISIFLILLVFPQTIADLHSEKQALLDFAAAVHHGPKVNWNSSTSICTSWVGVTCNHDGTHVLSVRLPGVGLRGSLPPNTLGKLNGLVSLSLRSNSLNGNLPIDILSLPSIRFIYLQHNNFSGDIPEFLLPRLMILDLSYNSFTGQIPASIQNLTYLIGLSLQNNSLRGSIPGVNLPNLKNLDLSFNYLNGSIPSCLHKFPASSFRGNLMLCGAPLKQCSLVSLNTTLSPPIVSKKPSDLSNRKLSTGAKIAIALGGFTMMFLPALIVVFCCFKKKVGAQNVAPTEKGGKLKEDFGSGVQEHEKNRLIFFEGCSYNFDLEDLLRASAEVLGKGSFGTTYKAILEEGTTVVVKRLKEVAVGKKEFEQQMEIVQRLDHHPNLIPLRAYYYSKDEKLMVYDYSSTGSFSKSLHGTRETGRTPLDWDSRLKIMVGAARGIAHIHSANGRKFVHGNIKSSNVLLSIDFQGCISDFGLTPLTNFCASPRSPGYRAPEAIETRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDDVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLAMACVAEMPDTRPSMEEVARTIEEIGAFIS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2157 607 Gene3D Ribonuclease Inhibitor 27 137 IPR032675 -
Apr4g2157 607 ProSitePatterns Protein kinases ATP-binding region signature. 338 369 IPR017441 GO:0005524
Apr4g2157 607 SUPERFAMILY Protein kinase-like (PK-like) 336 599 IPR011009 -
Apr4g2157 607 PANTHER OS05G0588300 PROTEIN 10 604 - -
Apr4g2157 607 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Apr4g2157 607 ProSiteProfiles Protein kinase domain profile. 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2157 607 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Apr4g2157 607 CDD STKc_IRAK 338 602 - -
Apr4g2157 607 Gene3D Transferase(Phosphotransferase) domain 1 409 605 - -
Apr4g2157 607 PANTHER OS05G0480400 PROTEIN 10 604 - -
Apr4g2157 607 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Apr4g2157 607 Gene3D Ribonuclease Inhibitor 138 229 IPR032675 -
Apr4g2157 607 SUPERFAMILY L domain-like 43 224 - -
Apr4g2157 607 Pfam Protein kinase domain 335 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2157 Apr-Chr4 30667141 30669400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2157 12 602 Receptor kinase-like Gene Family AT5G58300 61.770 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr4g2157 Pkinase 3.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2157 - - gmx:100810832 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2157 4 30667141 30669400 Apr4g2157 4 30667141 30669400 ECH