Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2150 ATGGACCAGTTTCCTGTGCTGAGATCAGTGTTAGTGAAGTTTCAGACTATAACTGAAGACTTATCAGAGATGCAGAGGTGGGTGTTTGTGATACTTGCTGGAATGACATGGGTTTACTTAACTGCAAGGCCTGGTGTTCTTGTTGGTGCCATTGATGCATTCCTTTTGGCTCCACTTCAACTGCTTTTGGACAGTTTATCTGGAAGGAGAAATCTTAAGAGAACTGATTTTCTTATTGGAGATAAGCTTGGAGAAGGGTCATTTGGTGTTGTTTATTCAGGTGTTTTGGTCCCTAAGAATTTAGATGTAGAAGAGAGGTTGCAGAAGAGTGGAGGAGGCAAGGTCACTAAGTTGGAAGCTAAATCTATGGATAAAGTTATTCTTAAAAAGGTAAAGGTAGGAATTGAAGGGGCAGAAAAATTTGGTGATTTTGAGGAGTGGTTCAATTACAGGGTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTCCTTGGAAGTTTTGTTGCTGATAAAACCAATTCACAGTTCACAAAAGGAGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGACTGTTCTCTTGCTGATTACATGGCAGATAGAACCTTCCCTTCAAACTTAGAGTCTATCATGTTTCGACGTGTCTTGCAAGGTGTAGACTCTTCTAAACGAGATGCATTGATCATCAAGCAAATAATGCGCCAGATCATTACATCTCTTAAGAAAATACATGACACAGGCATTGTGCATAGGGATGTAAAGCCTTCTAACTTGGTGGTTACCAAACGGGGGCAGATTAAACTCATTGATTTTGGTTCAGCAACAGACCTTAGGATTGGAAAGAATTATGTTCCCAACTGTAACCCTCTGGATCCTGACTACTGTCCCCCTGAACTATCTGTGCTACCAGAAGAAACAATAAATCTTCCACCAGAGCCAATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCTGCCGGGATTGTACTCCTGCAAATGGCAATACCAACCTTAAGATCTCCAGCTGGCTTGAAGAATTTCAATTTTCAGATGAAAACATGTGGGTATGATTTGAACAAATGGAGGGAGTCTGCTCGCATCAAGCCCAACTTCCAAATTCTTGATGGTGACTCTGGTAGAGGGTGGGACTTGGCAACAAAGCTTATCTCCTCTGAAAGAAGAGGACGTTTATCTGCTGCTGCTGCTTTGAGGCATCCTTATTTCCTTCTGGGTGGAGATCAGGCAGCTGCAGCCCTTTCAAAATTAAGCTTAAGCACAAAGTGA 1311 0.4195 MDQFPVLRSVLVKFQTITEDLSEMQRWVFVILAGMTWVYLTARPGVLVGAIDAFLLAPLQLLLDSLSGRRNLKRTDFLIGDKLGEGSFGVVYSGVLVPKNLDVEERLQKSGGGKVTKLEAKSMDKVILKKVKVGIEGAEKFGDFEEWFNYRVSRAAPETCAKFLGSFVADKTNSQFTKGGKWLVWKFEGDCSLADYMADRTFPSNLESIMFRRVLQGVDSSKRDALIIKQIMRQIITSLKKIHDTGIVHRDVKPSNLVVTKRGQIKLIDFGSATDLRIGKNYVPNCNPLDPDYCPPELSVLPEETINLPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPAGLKNFNFQMKTCGYDLNKWRESARIKPNFQILDGDSGRGWDLATKLISSERRGRLSAAAALRHPYFLLGGDQAAAALSKLSLSTK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2150 436 Gene3D Transferase(Phosphotransferase) domain 1 212 419 - -
Apr4g2150 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Apr4g2150 436 Pfam Protein kinase domain 227 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2150 436 ProSiteProfiles Protein kinase domain profile. 77 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2150 436 SUPERFAMILY Protein kinase-like (PK-like) 75 418 IPR011009 -
Apr4g2150 436 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 3 434 - -
Apr4g2150 436 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 3 434 IPR044803 GO:0004674|GO:0009579
Apr4g2150 436 Gene3D Phosphorylase Kinase; domain 1 65 187 - -
Apr4g2150 436 SMART serkin_6 77 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2150 Apr-Chr4 30612742 30617106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2150 77 276 MAP Kinase Kinase Kinase AT3G13530 24.138 1.62e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Apr4g2150 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2150 - - gmx:100795624 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2150 4 30612742 30617106 Apr4g2150 4 30612742 30617106 ECH