Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g2149 | ATGGTTTCCTCTCAGTTTTCTGGTTTGACGACGGCTGGTGCATACAAACCGTTACAGACTCATTTACTCTTTCCTGCGGACCTTCCTGATACGGTAAACACGGAGCATATTGAGCTAGATTTCTCTGATGTCTTTGGTCCAGTTACAGTAGATTTGAGTAACATTGATTCCACTACTGGTGAGCCTGTAGAAGAAGTGAGCGAGCTGGTTTATGATGACCCGGAAGTCATTTACACTCGCTCTCATTCTCTGGTTGGCCCTTCTACTTGTGTTAATCAATCCCTTAAGCTTGGAAAACTCACCATACATGAGACTGAGGATTCATTAGAATTAGTGGAGGATTTCACTGGAGAGACCATTGAAGACATAAAAGAATCTTCCTTTGTGGAGGAATCTTTGAAAGATGAAGATGGGAATCTCATGAAGATCCAGAGAGTTAGCATTGAGGATTTCGATATTTTGAAGGTTGTGGGGCAGGGTGCATTTGCAAAAGTATATCAGGTAAGGAAAAAAGGTACATCAGAAATATATGCCATGAAGGTTATGCGGAAGGACAAAATTATGGAGAAGAATCATGCTGAATACATGAAAGCTGAGAGGGATATTATGACAAAGATAGAGCACCCCTTTGTTGTTAAGCTCAGATACTCTTTTCAGACAAAGTACCGACTATATCTTGTGCTGGATTTTGTAAATGGCGGCCATCTCTTCTTCCAGCTTTATCATCAAGGCCTTTTCAGAGAGGATCTGGCACGCGTATACACTGCTGAGATTGTTTCTGCAGTTTCACATCTCCATTCAAATGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTACTGGATGCTGATGGCCATGTTATGCTGACTGATTTTGGCTTAGCAAAACAGTTTGAAGATAGTACAAGATCAAATTCGATGTGTGGTACATTAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGACAAGGCTGCTGATTGGTGGAGTGTTGGTGTCCTACTGTTTGAGATGCTTACTGGAAAGCCACCTTTCTGTGTTGGGAGCCGTGACAGAATTCAGCAAAAGATAGTTAAAGACAAGATTAAGCTGCCAGCATTTTTGTCAAGTGAAGCACATTCACTGTTGAAAGGGCTGCTACAGAAGGAAGCAACTAAGCGCTTAGGTTGTGGAGCCCGGGGGATTGAAGAAATTAAAGGCCACAAGTGGTTTAAACCAATCAATTGGAAAAGGTTGGAAGCACGAGAGATCCAACCAAGCTTTCGGCCAGAAGTAGCTGGGAAGCACTGTGTTGCCAACTTTGAGAAGCGCTGGACTGATATGCCTGTTGTGGACTCTCCAGCTGCCAGCCCAAATGGTGGAAATCCCTTCAAGGACTTCTCTTATGTGAGGCCTGCAGCCTCTTTTCTTCAAAGCCATAGCCCTGCTTGCTAA | 1443 | 0.4324 | MVSSQFSGLTTAGAYKPLQTHLLFPADLPDTVNTEHIELDFSDVFGPVTVDLSNIDSTTGEPVEEVSELVYDDPEVIYTRSHSLVGPSTCVNQSLKLGKLTIHETEDSLELVEDFTGETIEDIKESSFVEESLKDEDGNLMKIQRVSIEDFDILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDIMTKIEHPFVVKLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARVYTAEIVSAVSHLHSNGIMHRDLKPENILLDADGHVMLTDFGLAKQFEDSTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGVLLFEMLTGKPPFCVGSRDRIQQKIVKDKIKLPAFLSSEAHSLLKGLLQKEATKRLGCGARGIEEIKGHKWFKPINWKRLEAREIQPSFRPEVAGKHCVANFEKRWTDMPVVDSPAASPNGGNPFKDFSYVRPAASFLQSHSPAC* | 481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g2149 | 480 | CDD | STKc_AGC | 157 | 407 | IPR045270 | GO:0004674|GO:0005524 | |
Apr4g2149 | 480 | ProSitePatterns | Protein kinases ATP-binding region signature. | 157 | 180 | IPR017441 | GO:0005524 | |
Apr4g2149 | 480 | Gene3D | Transferase(Phosphotransferase) domain 1 | 231 | 426 | - | - | |
Apr4g2149 | 480 | SUPERFAMILY | Protein kinase-like (PK-like) | 148 | 469 | IPR011009 | - | |
Apr4g2149 | 480 | SMART | serkin_6 | 151 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2149 | 480 | Pfam | Protein kinase domain | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2149 | 480 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 1 | 478 | - | - | |
Apr4g2149 | 480 | ProSiteProfiles | Protein kinase domain profile. | 151 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2149 | 480 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 270 | 282 | IPR008271 | GO:0004672|GO:0006468 | |
Apr4g2149 | 480 | Gene3D | Phosphorylase Kinase; domain 1 | 148 | 448 | - | - | |
Apr4g2149 | 480 | SMART | pkinase_C_6 | 408 | 467 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Apr4g2149 | 480 | Pfam | Protein kinase C terminal domain | 429 | 465 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Apr4g2149 | 480 | PANTHER | SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 | 1 | 478 | - | - | |
Apr4g2149 | 480 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 408 | 475 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g2149 | Apr-Chr4 | 30604405 | 30609532 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g2149 | 1 | 474 | AGC Kinase Gene Family | AT3G08720 | 68.410 | 0.0 | 665 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC-Pl | Apr4g2149 | Pkinase | 2.5e-75 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g2149 | K04688 | - | gmx:100804819 | 889.026 |