Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2146 ATGAGTCCTGATCAACCCTTGCTTCTCCAATCGGATCATCCTTCAGTGGTTCATCATCGCCATCGCAAATCCGGATCCTGGACCCGCCACTGCACCAATGCTTCCTTCACATCCTCTATGTTCGACGATGCTCAAGCTCAGAGCGTCGATTTTGATGTGAAGGACAAAGAGTCAGAGGTTGTGGTTTCTAGGGATTCTAGTTTTCACTCTGCATTTGGGAATAATAATAATAATAGTATCACTGAGAAGGAGTTTCAGCGTGTCGAATCACGCTTTTCTGGACAGTTTCCTTTGGAATGCCCCGCGCACAAGAGGGGACTCTCGGTGTCGTGGGGCGGGATGGAACTGCACGATACTGGAAGCCAGAGTGTGCCCTTTGAGATATCTGGAGCTGGATCTTTAGTTCAGGATAGGTTGAGTAAGTCTCAGAGGATTAGGCACAAGAGTGTGCAGTTTGATGATGCTGCATTTCATGAGGATAGTGCTAGGTTGATTTATATTAATGATCCGAAGAGGACGAATGATAAGTATGAGTTTACTGGGAATGAGATTAGAACTAGCAAGTATACGTTTATAACATTCTTGCCCAAGAATTTGTTTATTCAGTTTCATAGGGTTGCTTATCTGTATTTCCTTGCCATTGCCGCGCTGAACCAGCTTCCTCCGTTGGCTGTTTTTGGGAGAACGGTGTCTCTTTTCCCGCTGTTGTTCGTGCTTTGCGTAACAGCTATTAAGGATGGTTATGAGGATTGGCGTAGGCACAGGTCAGATCGCAATGAGAACAACCGGGAGTCTCTGGTGCTTCAGTCTGGTGATTTCCGGTCGAAGAAGTGGAAAAATATACAAGCTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACGATCCCGGCTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACGAGATATGCTAGGCAAGAAACAGCTTTGGCAGTTTCATCAGAAGCTTGTGATGCTTTTGGGATAATTAGATGCGAGCAACCAAACCGGAATATTTATGAGTTCACAGCCAACATGGAGTTCAATGGGCTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGCTGCCAACTGAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCAGGACAGGAGACAAAAGCAATGCTGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAAACTGGAAAGTTATATGAACAGAGAAACCCTTTGGCTGTCAATTTTTCTCTTTATCATGTGTTTGGTTGTGGCCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGAACCAGCTTGACACCTTGCCTTACTACAGAAAAAGATACTTCAACAATGGGCCGGATAATGGAAAGAAATATAAGTATTATGGGATACCTATGGAAGCGTTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGACTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGCAAGCTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATATATTTTCAGACAAGACGGGAACACTCACAGAAAACAAGATGGAATTTCGGATGGCTAGTGTACATGGGAAGAATTATGGGAGCTCCTTGTCCATGGCTGATATTACAGCAGTGGCAGCTGTTATTCCTAAACGGAGATGGAAGCTCCAATCTGAAATAGCAGTGGATTCTGAACTGATGACAATGTTGCGGAAAGACTCAAATAGAGAAGAAAGGATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTAATCCCTATACCTGGTGGTGGAAAATTTTCTGGTTGTGGAACTAGTGAATTTAGTGAAGATGTTGAATGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCCGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGACATATTGTTATTGACGTCAATGCAAATGGAAGTGAGAGCAGCAATAGCTTATGGCATGCAACTCAGGGCCATTTGAGTGAATATTCTTCACAAGGTTTGCGCACTCTTGTAGTTGCCTCAAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGCACTTCATTGACTGACAGAGCTACTAAACTACGTCAAACAGCAGCTCTTATAGAATGCAATTTAAAACTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCCATTGAATCCCTGCGGCAAGCTGGAATCAAGGTTTGGGTTCTTACTGGTGATAAACAAGAGACGGCAATTTCAATTGCTCTTTCCTGCAAACTTCTCAGTGCAGATATGCAGCAGATTATTATCAATGGCACTTCAGAGGTCGAATGCAGAAATCTTTTGGGTGATGCTATAGCCAAATATGGTGTGAAATCTTCAGGTGGAAGGCGTCAGAATCTGAAGCAAAAAACCAATGCTAGAGGTGGTGATCTTGATATTCCCAATGGTTCAAAGTCATTGAGCTTTCCCAAATGGAATCCTGGAAAAGAAGAAGGAACTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTTGACCTTGCAACTTCCTGTCGGGTTGTGCTGTGTTGTCGGGTTGCACCATTGCAAAAGGCAGGAATTGTTGATCTAATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGTGATGGGGCCAATGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGGCAATTTCAGTTCTTGAAAAGATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTGGTTCTATACAACTTCTACCGCAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACAGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTATACCTACCATTTTTGTTGGTATTCTGGACAAAGACTTGAGTCATAGGACACTTTTGCAGTATCCAAAACTGTATGGTACTGGTCACAGGCAAGAAGCTTACAATATGCAGTTGTTTTGGATCACAATGATGGACACAGTGTGGCAAAGCCTGGTTCTCTTCTACACACCATTGTTCACCTATAAGGACAGTTCCATTGATATATGGAGCATTGGAAGTTTGTGGACAATCGCAGTTGTTATCCTTGTAAATGTACACTTGGCTATGGACATCAACCGATGGGTATTAATTACTCATGTCGCCATCTGGGGATCAATAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTATTTCCCAATTACTGGACTATTTATCATCTTGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAATTATTGTGGCATTGCTCCCACGCTTTACTTGCAAAGTTGTTTGTCAAATCTTTTGGCCTTCAGATATCCAGATAGCTAGAGAAGCTGAGTTAATGAGGAGACGACAGCGTAATTTGCAGCCCAGGCAACGAGTTTCCGGTTAA 3759 0.4246 MSPDQPLLLQSDHPSVVHHRHRKSGSWTRHCTNASFTSSMFDDAQAQSVDFDVKDKESEVVVSRDSSFHSAFGNNNNNSITEKEFQRVESRFSGQFPLECPAHKRGLSVSWGGMELHDTGSQSVPFEISGAGSLVQDRLSKSQRIRHKSVQFDDAAFHEDSARLIYINDPKRTNDKYEFTGNEIRTSKYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKNIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETALAVSSEACDAFGIIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETLWLSIFLFIMCLVVALGMGLWLVRHKNQLDTLPYYRKRYFNNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRMASVHGKNYGSSLSMADITAVAAVIPKRRWKLQSEIAVDSELMTMLRKDSNREERIAAHEFFLTLAACNTVIPIPGGGKFSGCGTSEFSEDVECIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNANGSESSNSLWHATQGHLSEYSSQGLRTLVVASRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIALSCKLLSADMQQIIINGTSEVECRNLLGDAIAKYGVKSSGGRRQNLKQKTNARGGDLDIPNGSKSLSFPKWNPGKEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHRTLLQYPKLYGTGHRQEAYNMQLFWITMMDTVWQSLVLFYTPLFTYKDSSIDIWSIGSLWTIAVVILVNVHLAMDINRWVLITHVAIWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVCQIFWPSDIQIAREAELMRRRQRNLQPRQRVSG* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2146 1252 Gene3D - 562 585 IPR023299 GO:0000166
Apr4g2146 1252 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 705 1248 - -
Apr4g2146 1252 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 159 699 - -
Apr4g2146 1252 Pfam haloacid dehalogenase-like hydrolase 548 820 - -
Apr4g2146 1252 Gene3D - 771 998 IPR023214 -
Apr4g2146 1252 CDD P-type_ATPase_APLT_Dnf-like 181 1118 - -
Apr4g2146 1252 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 485 583 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g2146 1252 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 928 1044 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g2146 1252 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 768 822 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g2146 1252 Pfam E1-E2 ATPase 263 510 - -
Apr4g2146 1252 SFLD Haloacid Dehalogenase 536 1009 - -
Apr4g2146 1252 MobiDBLite consensus disorder prediction 1 24 - -
Apr4g2146 1252 SUPERFAMILY Calcium ATPase, transmembrane domain M 179 1225 IPR023298 -
Apr4g2146 1252 Pfam Phospholipid-translocating ATPase N-terminal 165 230 IPR032631 -
Apr4g2146 1252 Gene3D - 238 408 - -
Apr4g2146 1252 Gene3D - 549 561 IPR023214 -
Apr4g2146 1252 SUPERFAMILY HAD-like 539 1003 IPR036412 -
Apr4g2146 1252 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 159 699 - -
Apr4g2146 1252 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 705 1248 - -
Apr4g2146 1252 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 179 703 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr4g2146 1252 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 704 1233 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr4g2146 1252 SFLD p-type atpase 536 1009 IPR044492 -
Apr4g2146 1252 Pfam Phospholipid-translocating P-type ATPase C-terminal 986 1226 IPR032630 -
Apr4g2146 1252 Gene3D - 536 548 - -
Apr4g2146 1252 ProSitePatterns E1-E2 ATPases phosphorylation site. 554 560 IPR018303 -
Apr4g2146 1252 SUPERFAMILY Calcium ATPase, transduction domain A 262 404 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2146 Apr-Chr4 30562277 30569361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2146 142 1235 Primary Pumps ATPases AT5G04930 54.948 0.0 1250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2146 K14802 - gmx:100789830 2132.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2146 4 30562277 30569361 Apr4g2146 4 30562277 30569361 ECH