Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2137 ATGGGGTGTTTCACTGTATTGAAGAACAAGAAGAAAAAGTCTGATCAGATTTTGTATGTAAAACGGGCAAGCCATAATGAGCATGTACCAACAGTTCTGCCCGAACCTCAAACTCATACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCACTAATAAAGTCAGTAACAATAGAACAAGAACATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGAAGCTTTGGCCTCAATTGAGTATGAGGAACAAGAAGAGTCAAAACACCGGGCTGCATCAATGAAGGAGCAGCGTTCATCTAGTCCACAACCTTTACCCCTTCCATCTCCTCAGGGAGGTGGTGTATTGAAGGCTGTTGGCAGCTTTAAGTCAGTGACAGCTAGTGGTCCTCTATATGCTTCTGGACCTTTGCCGCTTCCACCAACTGGGTCACTTAGGAACTTTATGTACGAGGAAATTGCTGCTGCTTGCCACAATTTCTCTTCAGATAGATGCATGTCCGAATGTCTTTCCTCCACAATATATAAAGCGTCCTTTGGCGATGATGCTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACACGGCTTCACCTATCATCTCAGGGCTTGAAGGAATTCATTAATGAGGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCACGAGAGGCTTCAGAACATAGGATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCTTATTGTATGGGAGATCTGATGGGCCATCTATTGATTGGAACACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCGATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCAGAGGAAGAGATATCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAACGTATGGAGTTTTGGAATTTTCCTTCTGGAGCTACTCACAGGAAGGAAGAATCTTGACAGCCGTCACCCCAAGGAAGAGAGAAATTTAGTCAAGTGGAGCCGGCCCTTCCTAGCTGATAATCATCGTCTGTCGTTGATCATGGATTCTCAACTCAAAGGTCGGTTTCCTTCCAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAAAGACCTACCATGAGAACTGTTGTTGAGCATCTCAAGATGATTCAAGATTTGAAATACTCGTGCCGGTTCCCACTGCAGGAGCCAGCATCAAATGCTGGAAAGCAGATGTCAAGATCACCAAGTCTTAATGGTATCATTACCCCTGCTCCAAGGTTGAGTTTCTCTCCGTCGCCACCATCGGGTGTTGCCCCCGTATCTGTTTCACCTCCAAGATGGTCGGGAGTGCCGATCCTCCTTCCGCCTAGGGCTTGTTCTTCCAGTATCTCTTTGGAGGAGCTTGATAGGCAAGAAAGTCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1644 0.4477 MGCFTVLKNKKKKSDQILYVKRASHNEHVPTVLPEPQTHTRSLQSAPPSFRTRVKPIQPTNKVSNNRTRTLSAPSTLDAAEQEALASIEYEEQEESKHRAASMKEQRSSSPQPLPLPSPQGGGVLKAVGSFKSVTASGPLYASGPLPLPPTGSLRNFMYEEIAAACHNFSSDRCMSECLSSTIYKASFGDDASSSKKFEATVTRLHLSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREASEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNHRLSLIMDSQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVEHLKMIQDLKYSCRFPLQEPASNAGKQMSRSPSLNGIITPAPRLSFSPSPPSGVAPVSVSPPRWSGVPILLPPRACSSSISLEELDRQESRKSSSSASRRASVEGF* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2137 547 PANTHER OS01G0588500 PROTEIN-RELATED 150 540 - -
Apr4g2137 547 PANTHER OS01G0588500 PROTEIN-RELATED 47 147 - -
Apr4g2137 547 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 47 147 - -
Apr4g2137 547 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 150 540 - -
Apr4g2137 547 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Apr4g2137 547 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Apr4g2137 547 MobiDBLite consensus disorder prediction 462 501 - -
Apr4g2137 547 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Apr4g2137 547 MobiDBLite consensus disorder prediction 521 547 - -
Apr4g2137 547 MobiDBLite consensus disorder prediction 463 483 - -
Apr4g2137 547 MobiDBLite consensus disorder prediction 31 77 - -
Apr4g2137 547 MobiDBLite consensus disorder prediction 90 104 - -
Apr4g2137 547 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2137 547 SUPERFAMILY Protein kinase-like (PK-like) 148 454 IPR011009 -
Apr4g2137 547 MobiDBLite consensus disorder prediction 28 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2137 Apr-Chr4 30466203 30471195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2137 148 448 Receptor kinase-like Gene Family AT4G02010 37.785 6.16e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Apr4g2137 PK_Tyr_Ser-Thr 9.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2137 - - gmx:100809117 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2137 4 30466203 30471195 Apr4g2137 4 30466203 30471195 ECH
Apr4g2137 4 30466203 30471195 Apr10g0857 10 20904007 20908351 PCT