Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2131 ATGGAATTTTCTGATACAATCAATACAGCCATGTACAAGGGAAGATTTTGCACTAGTGGTGGAGTTAAGGCTCAGCTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGCCGTTTCAGGGATATTCTGGGCAAAGGAGCTATGAAGACTGTGTATAGGGCATTTGATGAATTACTAGGAATTGAAGTGGCTTGGAACCAAGTCAAGCTCGGTGATGTCTTTCATTCACCAGAGCAACTTCAGCGCCTTTATTCAGAAGTTCATCTCCTTAAGCACCTTGACCATGAATCTATGATGATATTCTATGGTTCTTGGATCGATGTCAATAACAGAACCTTCAACTTCGTCACTGAATTGTTCACCTCTGGCACCCTCAGAGAGTATAGACAAAAATATAAGCGAGTAGATATCCGAGCAGTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTACTTACACAGCCGTAGTCCTCCTGTAATACATAGAGACCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGTCAGGTCAAGATTGGTGACTTAGGTCTTGCAGCTATACTTCGAAGCTCCCAACATGCCCATAGTGTCATAGGTACACCAGAGTTCATGGCACCAGAACTGTATGAAGAGAAATACAATGAGCTGGTAGATATATACTCCTTTGGTATGTGTATGATAGAGATGCTTACTTTTGAGTTCCCATACAGTGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCCGATGCATTTTACAAAATCCAAGATTCGGAAGCCCAGAAATTCGTGGGAAAATGTTTAGCAAATGTCTCTAATAGACCATCAACAAAGGAACTTTTATTGGACCCATTTTTAGCCACGGATCAACTTGAATCACCATGCATACCGTTATCTACAAATCAAACTACTAAGCTCAACTACACTGCAGTATTTCCCAGTGAGAATCTTCCACCTTGTGATCTAACAAAGAGCGCAGATATGACAATCACAGGGTCAATAAACGAAGAGGACAACACAGTTTTCCTCAAAGTGCGGATATGTGACAAAATGGGGCTAACAAGACACGTGTTCTTTCCATTTGACACAATAAAAGACACTGCTATTGAGGTGGCAATGGAGATGGTACAAGAACTTGAAATTACCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGATATCAAGTTTGGTTCCAAGTTGGAGGGATCGGGTTAAGTGTCACCATCAACGACAATACAGCTTTAACTATGAAGAAGATGAGGATGTGAACAACCATCATCCTTTCTTCATATCATCTTCTCCATCATCCCCCCATGGGTCTCTCCACGTGTCTGCTTCCCCCTCCAAGACCCACTTGCGTGGAAACCATTACCCTTTCACTCAAGAATGGCCTCAAGATGATCTATTTATGAACGACGACACAGGCTCTCAAAGTTCAATGAACTCCTTAAAGTGTTCCAATTTCCAATACTGCGAGCCAGCCCATAACGAAGACGAGCCCGGCCCAACAGTTGCAGTAGAGAGAGGCGAACCAAACAAGTGTACAAGAAAACACGCAGCAGCAACTAGTTTCACGAAACAGTTTCAGTACCCGACGAGAGTGGACCCTTGCAGTTGTAGATGTGGGTCGAGCCAAGGGTGCGCAAGGCTAACAAGGATTCGTTCGTGCCCACACGAGCGTAGGAGCCAGTTGCTTCAGCGTTCGCTAATGTTGGAGGAGATGTACAAATACAAGAGAAGGTTGTATAACACTGTTGGGGCCGTTGAGAACATTGGGTTTCGCCATCCAGAGAGAACTGCATGCTTAATCCCTCGTTGA 1860 0.4387 MEFSDTINTAMYKGRFCTSGGVKAQLGYVETDPSGRYGRFRDILGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLDHESMMIFYGSWIDVNNRTFNFVTELFTSGTLREYRQKYKRVDIRAVKNWARQILSGLEYLHSRSPPVIHRDLKCDNIFVNGHQGQVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECSNPAQIYKKVTSGKLPDAFYKIQDSEAQKFVGKCLANVSNRPSTKELLLDPFLATDQLESPCIPLSTNQTTKLNYTAVFPSENLPPCDLTKSADMTITGSINEEDNTVFLKVRICDKMGLTRHVFFPFDTIKDTAIEVAMEMVQELEITHLEPLEIAAMIDHEISSLVPSWRDRVKCHHQRQYSFNYEEDEDVNNHHPFFISSSPSSPHGSLHVSASPSKTHLRGNHYPFTQEWPQDDLFMNDDTGSQSSMNSLKCSNFQYCEPAHNEDEPGPTVAVERGEPNKCTRKHAAATSFTKQFQYPTRVDPCSCRCGSSQGCARLTRIRSCPHERRSQLLQRSLMLEEMYKYKRRLYNTVGAVENIGFRHPERTACLIPR* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2131 619 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Apr4g2131 619 Gene3D Transferase(Phosphotransferase) domain 1 121 302 - -
Apr4g2131 619 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2131 619 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2131 619 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Apr4g2131 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Apr4g2131 619 CDD STKc_WNK 36 296 - -
Apr4g2131 619 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2131 619 PANTHER WNK KINASE 3 612 - -
Apr4g2131 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2131 Apr-Chr4 30377575 30381770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2131 19 435 MAP Kinase Kinase Kinase AT3G51630 67.849 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr4g2131 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2131 K08867 - gmx:100272206 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2131 4 30377575 30381770 Apr4g2131 4 30377575 30381770 ECH
Apr4g2131 4 30377575 30381770 Apr10g0846 10 20768897 20774718 PCT