Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2128 ATGAGAGAGCCACAGAACGATGCCGTTTTAAAAGAATTAACAGAAACAGAGGCATCCACGACAAAAGAATTTGAGGTGCCGTCCGGCGTCGTTTTGTTCGGGAAATACGAACTACAGAGGTTACTAGGCGTTGGTGCATTCGCCAAAGTGTACCACGCGACGCAAGTGGACACGCGCCAGAGCGTGGCGGTGAAGGCCGTGAGCAAACACAAGGTCCTCAATGGAGGCTTCGCCGCCAACGTGGAACGCGAGATCTCCATCATGCGCCACCTTCACCATCCGAACATCGTTAACATCTTTGAAGTCCTCGCCACGAAGACCAAGATTTACTTCATCATGGAGTTCGCCGCCGGCGGAGAACTCTTCCACGAGGTCGGAAAAGGACGGCTCACCGAGGACCTCGCCCGGCGGTACTTCCGGCAACTCATCTCTGCCGTGAAGCACTGCCACTCCCGTGGCGTGTTCCACCGTGACCTGAAGCTGGATAACCTCTTGATGGACGAGAACGGGAACCTCAAGGTGTCGGATTTCGGGTTAAGCGCGGTTACGGATCAGATCCGACCCGACGGGCTGTTACACACAGTTTGTGGGACCCCTACTTACGTGGCACCTGAGATTCTGGCGAGGAGAGGTTACGATGGTGCCAAGGTGGACGTGTGGTCATGCGGCGTCGTTTTGTTCGCTCTCACAGCAGGGTATTTACCCTTCAATGATTACAATATTACGGTTTTGTACAGAAAGATTTACCGCGGTCAATTTCGGTTCCCGAAATGGATGTCACATGATCTGAGAAAGCTCTTATCGCGTTTGTTGGACACGAATCCCGAGACAAGGATCACCGTTGATGAGATCTTTGAAGACACGTGGTTTAAAAGAGGTGAGTACCGGGTCGACCGGGTTTTGCTTAAGGAGTGCGAGTGTGAGGAGAGTCGAACCGGGTTCAAGTCTTTGAACGCGTTTGATTTGATATCGTTTTCGACCGGGTTGGATATGTCGGGTTTGTTTGAGGATCCAAACGGGTCGGATTTTGTGGAGCGGGTCATTTCAGGGGAGGAACCGGAGAGGATCATGGGGAAGGTTGAAGAGGTTGCGAAGGATGCCGGGGTGGTGGTGAAGAGGATGGGGAATGGTGGTGAAGCCAAGTTGGAAGGGCAAGACGGTAATTTGCTTGCTCTTCTTGTTGTTTACCGGTTAACGGATGAGCTGGTGGTGATTGAAGTGAAGAGATGTGAAAGAGTGGGATGTGGCGAATTGTTATGGAAAGATATATTGCGACCTTTGCTTCTTGAACTGGCTCATAAACAGGAAGCGCCGGTCTTCCGGTGA 1326 0.5196 MREPQNDAVLKELTETEASTTKEFEVPSGVVLFGKYELQRLLGVGAFAKVYHATQVDTRQSVAVKAVSKHKVLNGGFAANVEREISIMRHLHHPNIVNIFEVLATKTKIYFIMEFAAGGELFHEVGKGRLTEDLARRYFRQLISAVKHCHSRGVFHRDLKLDNLLMDENGNLKVSDFGLSAVTDQIRPDGLLHTVCGTPTYVAPEILARRGYDGAKVDVWSCGVVLFALTAGYLPFNDYNITVLYRKIYRGQFRFPKWMSHDLRKLLSRLLDTNPETRITVDEIFEDTWFKRGEYRVDRVLLKECECEESRTGFKSLNAFDLISFSTGLDMSGLFEDPNGSDFVERVISGEEPERIMGKVEEVAKDAGVVVKRMGNGGEAKLEGQDGNLLALLVVYRLTDELVVIEVKRCERVGCGELLWKDILRPLLLELAHKQEAPVFR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2128 441 CDD CIPK_C 318 428 - -
Apr4g2128 441 SUPERFAMILY Protein kinase-like (PK-like) 19 302 IPR011009 -
Apr4g2128 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Apr4g2128 441 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 17 438 - -
Apr4g2128 441 PANTHER - 17 438 - -
Apr4g2128 441 SMART serkin_6 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2128 441 Pfam NAF domain 315 372 IPR004041 GO:0007165
Apr4g2128 441 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2128 441 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Apr4g2128 441 ProSiteProfiles Protein kinase domain profile. 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2128 441 Gene3D Transferase(Phosphotransferase) domain 1 30 316 - -
Apr4g2128 441 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Apr4g2128 441 Gene3D Kinase associated domain 1, KA1 317 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2128 Apr-Chr4 30318412 30320656 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2128 23 437 CBL-interacting serine-threonine protein kinases AT2G30360 56.075 2.09e-163 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr4g2128 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2128 - K12761 gmx:100788245 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2128 4 30318412 30320656 Apr4g2128 4 30318412 30320656 ECH