Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2124 ATGGAACAGAAGGGAAGTGTGCTTATGCAAAGATATGAACTAGGGAGATTATTAGGCCAAGGAACCTTTGCAAAGGTCTACCATGCTAGGAACCTTGTAACTGGCATGAGTGTGGCCATTAAGGTAGTTGATAAAGAAAAAGCTTTGAAAGTTGGGATGATGGATCAGATTAAGCGTGAAATTTCAGTGATGAGATTAGTTAGACATCCATACGTGGTTGAGCTTTATGAGGTAATGGCCAGTAAAACCAAAATTTACTTTGTCATGGAGTATGTAAAAGGTGGTGAGCTCTTCAACAAGGTAGCAAAAGGAAAGCTCAAGATGGATGTTGCTAGGAGATATTTTCAGCAACTGATCAGTGCAGTTGACTACTGCCATAGCAGGGGTGTGTGCCATCGGGATTTAAAACCCGAAAATCTACTGTTGGATGAGAATGAGAATCTGAAGGTTTCAGATTTTGGGTTGAGCGCCCTCGCTGAATCCAAGTGCCAAGATGGATTACTGCATACTACATGTGGTACCCCTGCCTATGTTTCTCCAGAAGTGATAAGCAGAAAGGGTTATGATGGGATCAAAGCTGATATATGGTCTTGTGGGGTAATCTTGTATGTTCTATTGGCTGGTCATCTTCCATTCCATGATTCGAATCTGATGGAGATGTACAAGAAAATTGGTAGAGGAGAATTCAAATTTCCTAAGTGGTTTGCACCAGATGTTCGCCGGTTATTGTCCAAAATATTGGATCCAAACCCGAAGACCAGAATATCAATGGCCAAGATTATGGAAAGTTCTTGGTTTAGAAAGGGGTTAGAGAAGCCGATTATTATTGAGACAGAAAACCAAGAACTAACACCTCCAGTTGCTGATGGAGTATTTGAAGCATGCGAGAATGGTGGTCCTATTGCAGAAACAAAGCAAGAAAAAGCAAAGCTGTGTAATTTAAATGCTTTTGATATCATCTCCTTCTCAACTGGTTTTGATTTATCCGGTTTGTTTGAGGACACCATTCTTAAGAAAGAGATGCGATTTGTGTCGAACAAGCCTGCCTCAAGTATAATATCTAAGTTGGAAGAGATTTCTAAGACTCTTCGCTTGAAAGTAAAGAAGAAAGATGGGGGTTTGTTCAAGTTGGAAGGTTCCAAGGAAGGTAGGAAAGGGACTGTCGGTATTGATGCTGAGATTTTTGAGATTACCCCATTATTCCATCTGGTGGAATTAAAAAAGGCCAATGGGGACACCGTGGAGTACCAGAAGCTTCTTAAACAGGACATCAGACCAGCACTTAAAGACATAGTTTGGACCTGGCAAGGAGAACAACCGCCCCAACTCCAACATGAAGTGATGCAGGAAGAGCAACATCCTTCTCATACTGCCTAG 1377 0.4154 MEQKGSVLMQRYELGRLLGQGTFAKVYHARNLVTGMSVAIKVVDKEKALKVGMMDQIKREISVMRLVRHPYVVELYEVMASKTKIYFVMEYVKGGELFNKVAKGKLKMDVARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENENLKVSDFGLSALAESKCQDGLLHTTCGTPAYVSPEVISRKGYDGIKADIWSCGVILYVLLAGHLPFHDSNLMEMYKKIGRGEFKFPKWFAPDVRRLLSKILDPNPKTRISMAKIMESSWFRKGLEKPIIIETENQELTPPVADGVFEACENGGPIAETKQEKAKLCNLNAFDIISFSTGFDLSGLFEDTILKKEMRFVSNKPASSIISKLEEISKTLRLKVKKKDGGLFKLEGSKEGRKGTVGIDAEIFEITPLFHLVELKKANGDTVEYQKLLKQDIRPALKDIVWTWQGEQPPQLQHEVMQEEQHPSHTA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2124 458 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 442 - -
Apr4g2124 458 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Apr4g2124 458 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Apr4g2124 458 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2124 458 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2124 458 SUPERFAMILY Protein kinase-like (PK-like) 8 287 IPR011009 -
Apr4g2124 458 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Apr4g2124 458 Pfam NAF domain 313 369 IPR004041 GO:0007165
Apr4g2124 458 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Apr4g2124 458 CDD CIPK_C 315 429 - -
Apr4g2124 458 PANTHER - 2 442 - -
Apr4g2124 458 CDD STKc_SnRK3 11 265 - -
Apr4g2124 458 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2124 458 Gene3D Kinase associated domain 1, KA1 310 434 - -
Apr4g2124 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2124 Apr-Chr4 30253097 30256571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2124 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 66.446 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr4g2124 Pkinase 3.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2124 K07198 - gmx:100803787 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2124 4 30253097 30256571 Apr4g2124 4 30253097 30256571 ECH
Apr4g2124 4 30253097 30256571 Apr10g0841 10 20673656 20677161 ECH