Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2119 ATGGCTACTACTTCTTTCTCCTTATGCATTATGCCAATCTTCAGAGTTTGGTTCCTTTTATTCTTATGCTCAATGGGGATAGTCTCAGCTCAATTGTCCTCTGATTTTTACTCAACATCGTGTCCAAATGTGCTTTCAACTATTAAGACAGCAGTGGACTCTGCTGTGAACAATGAGGCTCGAATGGGGGCATCCTTGCTACGTCTCCATTTTCATGATTGCTTTGTTCAAGGATGCGATGCATCAGTGCTATTAGATGACACAGCTAGTTTTACGGGTGAACAAACGGCATTTCCTAATGTTAACTCCTTAAGAGGTTTTGACGTAATAGACACCATAAAGTCTCAAGTGGAGAGCTTGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGCTGTAGCTGCAAGAGACTCTGTGGTTGCTCTTGGTGGAACCAGCTGGACAGTTGAATTGGGCAGAAGAGATTCAACCACAGCAAGTTTCAGTTTGGCAAACTCGGACTTGCCCGCTCCTTCCTTGAATCTAGGTGAACTTATCACTGCTTTCTCAAACAAAGGTTTCACAACCAAAGAAATGGTTGCTCTATCAGGATCTCACACAATTGGCCAAGCTAGCTGTTTAAACTTCAGAACAAGGATTTACAATGAGACCAACATTGATGCCACTTTTGCACAATCATTGAAAGCAAATTGTCCTAGCACAGGTGGTGATGGCAATTTGTCCCCTCTTGACACCACTACGGCAAACACCTTTGACAATGCATACTTCAAGAACTTGCAGGAACAAAAGGGTCTCTTGCACTCAGATCAAGAGCTTTTCAATGGAGGATCCACAGACTCTCAAGTAAATGCTTATAGCAATGATGCTGCTAGTTTCAAAACTGACTTTGCCAATGCAATGGTTAAAATGGGGAACCTTAGTCCACTCACTGGGTCTAGTGGCCAGATTAGGACCAATTGTAGGAAGATCAACTGA 975 0.4308 MATTSFSLCIMPIFRVWFLLFLCSMGIVSAQLSSDFYSTSCPNVLSTIKTAVDSAVNNEARMGASLLRLHFHDCFVQGCDASVLLDDTASFTGEQTAFPNVNSLRGFDVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGTSWTVELGRRDSTTASFSLANSDLPAPSLNLGELITAFSNKGFTTKEMVALSGSHTIGQASCLNFRTRIYNETNIDATFAQSLKANCPSTGGDGNLSPLDTTTANTFDNAYFKNLQEQKGLLHSDQELFNGGSTDSQVNAYSNDAASFKTDFANAMVKMGNLSPLTGSSGQIRTNCRKIN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2119 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PANTHER PEROXIDASE 72-RELATED 24 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Apr4g2119 324 Gene3D Peroxidase, domain 2 169 303 - -
Apr4g2119 324 SUPERFAMILY Heme-dependent peroxidases 31 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr4g2119 324 PANTHER PEROXIDASE 24 324 - -
Apr4g2119 324 CDD secretory_peroxidase 31 323 IPR033905 GO:0004601|GO:0042744
Apr4g2119 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Apr4g2119 324 Gene3D - 35 321 - -
Apr4g2119 324 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2119 Apr-Chr4 30195753 30197898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2119 27 324 Peroxidase AT5G05340 68.000 9.72e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2119 K00430 - gmx:100815142 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2119 4 30195753 30197898 Apr10g0831 10 20565086 20567258 PCT