Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2093 ATGGGAGGGTGTTGTAGTCACGATGTTTCAGTTCGAGGGAAGGTGGATAGTGAGGTAGATGATGGAGAATATGAGTATGATCATGACAATGACAATGATGTGTCCTATGAACATTGTGGAGCATGGGTCAGGTTAAGAGGATCCTCTAGGTTTGTGTCAATGTATACCCAACAGGGAAAAAAAGGTGTGAACCAAGATTCAATGACAGTTTGGGAGGACTATACTGGAGAAAAAGATATGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAAGTTTCACAATTTATTCGTGACAATCTACCCTCAAAACTGTCTGAAGCAATCAAAATGTCACAGCAGAAGGTCTGCAAATATTATGATGCTAATGATGCAGATACTGCCAGTTTTGATGATGTCTACCCTGAGAATGGCCACAACATGTCCCTTGCTTCATGGGAGGGATGCTTTCTGAAATCCTTTGATGAGATTGATGAGTACCTTGCTCAAGAAATTAACACTGACAGCTATTGTAGTGGTTGCACTGCTGTTACTTTAATTAAACAGGGTGACCAGCTCATAGTTGGCAATTTGGGTGATTCTCGTGCAGTTCTTTGCACAAGGGAAGGAGACGAACTCATTCCTATTCAACTCACTGTTGACTTGAAACCAGATATTCCAAGCGAAGCTTCAAGAATCATTAACTGTGAAGGAAGAGTTTTTGCAGCAGAAGAAGAACCAGACGTATACAGAATATGGATGCCTGATGATGACTGCCCTGGACTAGCCATGTCAAGAGCCTTTGGAGATTTTTGCCTCAAAGATTATGGCCTAATCTCACTTCCTGATGTATTTTATAGAAAAATTACCAAGCAAGATGAATTTGTGGTTTTGGCAACTGATGGGGTATGGGATGTGCTCACCAATGTTGAAGTAATAAACATAGTTGCTTCAGCACCAAGAAGGTCCTTAGCAGCCAAGTTGTTAGTAAAGCGTGCTGTTAGAGCGTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGATTGTGCTGTTATATGCTTGTTTTTCGATGAACAACCTTTTTTATCACATTCTCAATCCACTAGAAAGAATAGACATCGTAGCAAGAACCTGCATAAATCCACTAGAAATGAAGACACTGAAACTGTGGATGGCAAGGTTGGGGTTGAATTAGATGAAGAATGGAAAGCCCTTGGAGGGTTGGCTAGAGCCAACTCTATATCAAAACTTCCACGCCTTGCTAGGAATATGAGTAGACGGCAATCATATGTACCTTAA 1287 0.4141 MGGCCSHDVSVRGKVDSEVDDGEYEYDHDNDNDVSYEHCGAWVRLRGSSRFVSMYTQQGKKGVNQDSMTVWEDYTGEKDMIFCGVFDGHGPLGHKVSQFIRDNLPSKLSEAIKMSQQKVCKYYDANDADTASFDDVYPENGHNMSLASWEGCFLKSFDEIDEYLAQEINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTREGDELIPIQLTVDLKPDIPSEASRIINCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISLPDVFYRKITKQDEFVVLATDGVWDVLTNVEVINIVASAPRRSLAAKLLVKRAVRAWRYKYPGSKVDDCAVICLFFDEQPFLSHSQSTRKNRHRSKNLHKSTRNEDTETVDGKVGVELDEEWKALGGLARANSISKLPRLARNMSRRQSYVP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2093 428 MobiDBLite consensus disorder prediction 362 386 - -
Apr4g2093 428 SMART PP2C_4 40 350 IPR001932 -
Apr4g2093 428 Gene3D - 46 354 IPR036457 -
Apr4g2093 428 Pfam Protein phosphatase 2C 76 330 IPR001932 -
Apr4g2093 428 ProSiteProfiles PPM-type phosphatase domain profile. 51 352 IPR001932 -
Apr4g2093 428 CDD PP2Cc 50 352 IPR001932 -
Apr4g2093 428 PANTHER ALPHABET, ISOFORM E-RELATED 1 408 - -
Apr4g2093 428 SUPERFAMILY PP2C-like 48 354 IPR036457 -
Apr4g2093 428 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2093 Apr-Chr4 29795193 29797814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2093 1 365 PP2C-type Phosphatase Gene Family AT5G01700 52.304 3.28e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2093 - - gmx:100783603 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2093 4 29795193 29797814 Apr4g2093 4 29795193 29797814 ECH
Apr4g2093 4 29795193 29797814 Apr10g0807 10 20084713 20087415 PCT