Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2065 ATGCCTGTATCTCTTAGCATTGCTTTATTCTTCCAGTCTATTATGGCTTCAGCAACTTTTGTTGGCTTCCTCCTATTTCTCACTCTCCTACACCAAGTTCCCTCCAAGGCTTTGGTATTTGAAGGATTCAGTGATAACAATGAACTCATTCTTGAAGGATCTTCCATCATTAAAACCAGTCGTTTACTCAAGCTCACCAACAGCTCAACCAATATTATAGGCCATGCATTCTATTCCATACCCTTCCAAATGCTTGATAAAACAAATCATTCACTCCAACCAAATGCCCATTCCTTTAGTACCTCTTTTGTTTTCTCAATTGTGTCGCCTATTTCTGGCTCTGGTGGCTTTGGCCTTGCCTTCACCATAGCACCCTCAACAAAATTTCCTAGAGCTGAGGCTAGCCATTTTCTTGGTCTTGTTAACTCCACCAATGATGGCAATGCCTCAAATCACATCTTTGCAGTTGAATTTGACACAGTAAATGGTTATAAAGGTGATTCTGACTCTGAAGGAAACCATATTGGTGTAAATGTAAACGGCATGAACTCAAAAATTACTGAACCAGCTGCATATATTGAAGAAGGAACAGATAATGTAAAGGATGATTTTAGAATGGCCAAGGTTGATGCTGTCCAAGCTTGGATAGAATATGACGGTAAAAAGAGAGCTCTGAATGTAACAGTAGCTCCTTTACCGTTACCAAGACCAAGCAAACCACTTATACACAATCATCACATTGAACTTGACACTGTTATGGAGGAAAACATGTATGTTGGTTTCTCAGCATCAACGGGCAAGGAAATAAGCTCTCATTATCTCTTGGGATGGAGCTTTGTAGTGAATGGAATTGCCCCTTCACTAAATATTTCTAACCTTCCAAAGCCACCACCAAAGGAGAAAGATCCATCCTCATTTCCTTGGTTCAAGCTTGCAATTGGAATCTTGTCTGTTTTGACCTTGACCTTGTTGTGTCTTCTATTTTTGCAAACATATTATAGGAGACACGTGAATTTTGAGGCTCTTGAGGACTGGGAGATGGATTGTCCTCACAGGTTTAGATACAAAGATCTTCACATAGCAGCAAAGGGGTTCATAGAGAGCCAGCTGATTGGAGTTGGAGGCTTTGGTGCTGTGTATAAAGGTGTCTTACCTACCACAAAAGTTGAGGTTGCTATTAAGAGGATTGTGCGTAGCCCTTTTCATGGTATGAGGGAATTTTCTGCTGAGATTGAAAGCTTAGGAAAGTTGAGGCACAAGAATTTGGTGAACCTTCAAGGGTGGTGCAAGAAAAAGAATGATCTACTCCTAGTTTATGATTTCATTCCAAATGGGAGTCTTGATTCAGTCTTATACAATCCTAATGCCAATTTTGCTTTGAATTGGGACCAAAGATTCAACATTCTCAAAGGAATCAGTGCTGGGCTATTGTATCTGCATGAAGAGTGGGAGCAAGTGGTGATCCACAGGGATGTGAAAACTAGTAATATTCTAATAGATGGACACATGAATGCTCGTTTAGGTGACTTTGGACTTGCAAGGCTTTATAATCATGGTCAAGTATCACACACAACCAAAGTGGTTGGCACTGTTGGGTATATTGCACCAGAGTTAACACGCACAGGAAAGGCATCTACAAGAACTGATGTGTATGCATATGGGGTTGTGCTCCTTGAAGTGGCCACAGGTAAGAGACCTATTGAATCAGATCAATTTTTCTTGCTGGATTGGGTTATTGAAAATTACCATCTGGGTCAAATTCTAGAGGTAGTTGATCCTAGGCTGAATTCAGTTTATGATGAGGAAGAAGCTGAATTGGTTCTGAAGTTGGGTCTCCTATGTACCCATCATAGAGCAGATTATAGGCCTACCATGAAACAAGTTACAAGGTACCTTAACTTTGATGACCTTCTTCCTGACATTGCTGATTGGAGACACACTGTTTCTGATAGAAGCAGCGAGAGCTTAGGTTTCTTAGAAGCCACGTCTATGATAAATGTTGCAACATCAGAGTATTTATCCTCCATTAGCATGAGTACAAAGTCCATTGATTCTGGTAGATAG 2064 0.405 MPVSLSIALFFQSIMASATFVGFLLFLTLLHQVPSKALVFEGFSDNNELILEGSSIIKTSRLLKLTNSSTNIIGHAFYSIPFQMLDKTNHSLQPNAHSFSTSFVFSIVSPISGSGGFGLAFTIAPSTKFPRAEASHFLGLVNSTNDGNASNHIFAVEFDTVNGYKGDSDSEGNHIGVNVNGMNSKITEPAAYIEEGTDNVKDDFRMAKVDAVQAWIEYDGKKRALNVTVAPLPLPRPSKPLIHNHHIELDTVMEENMYVGFSASTGKEISSHYLLGWSFVVNGIAPSLNISNLPKPPPKEKDPSSFPWFKLAIGILSVLTLTLLCLLFLQTYYRRHVNFEALEDWEMDCPHRFRYKDLHIAAKGFIESQLIGVGGFGAVYKGVLPTTKVEVAIKRIVRSPFHGMREFSAEIESLGKLRHKNLVNLQGWCKKKNDLLLVYDFIPNGSLDSVLYNPNANFALNWDQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDGHMNARLGDFGLARLYNHGQVSHTTKVVGTVGYIAPELTRTGKASTRTDVYAYGVVLLEVATGKRPIESDQFFLLDWVIENYHLGQILEVVDPRLNSVYDEEEAELVLKLGLLCTHHRADYRPTMKQVTRYLNFDDLLPDIADWRHTVSDRSSESLGFLEATSMINVATSEYLSSISMSTKSIDSGR* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2065 687 SMART serkin_6 365 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2065 687 Pfam Legume lectin domain 39 294 IPR001220 GO:0030246
Apr4g2065 687 CDD lectin_legume_LecRK_Arcelin_ConA 39 283 IPR001220 GO:0030246
Apr4g2065 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Apr4g2065 687 Gene3D Transferase(Phosphotransferase) domain 1 442 637 - -
Apr4g2065 687 CDD STKc_IRAK 371 633 - -
Apr4g2065 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 298 IPR013320 -
Apr4g2065 687 ProSiteProfiles Protein kinase domain profile. 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2065 687 SUPERFAMILY Protein kinase-like (PK-like) 348 642 IPR011009 -
Apr4g2065 687 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Apr4g2065 687 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 23 681 - -
Apr4g2065 687 Gene3D Phosphorylase Kinase; domain 1 350 441 - -
Apr4g2065 687 Gene3D - 37 283 - -
Apr4g2065 687 Pfam Protein kinase domain 367 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g2065 687 PANTHER - 23 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2065 Apr-Chr4 29476195 29478370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2065 38 687 Receptor kinase-like Gene Family AT5G01560 46.617 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr4g2065 Pkinase 7.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2065 - - gmx:100802724 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2065 4 29476195 29478370 Apr4g2065 4 29476195 29478370 ECH
Apr4g2065 4 29476195 29478370 Apr10g0774 10 19396141 19398479 PCT
Apr10g0634 10 14931500 14935126 Apr4g2065 4 29476195 29478370 PCT