Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2064 ATGAATATGATGATGGAAGAAGAAAGAAATGACTCGGAATGTTCCAAGACAAGCCCTTCTAACGAAGAAGGTTGTGAAAATGAGGGCAATGAAGATGAGAATAAGCAAAACAACAATGGAGGAAGCTCAAGCAATAGCACTGTGGAAGAGAACGAGAAGAAGACAACTGTGAGGCCTTATGTTAGATCCAAGTTGCCAAGGCTACGTTGGACTCCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGTGGACAAGAGAGAGCAACCCCAAAGTTAGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAAGTAGTTGACCCAAATCAAGTATTGGCTGATCAAAGGGTTCTTGTAGACAATGGAGACAGAAATGTTTATAATCTAAGCCAAATTCCCATGCTTCAAGGCTATAATCCAACCCAAAGTTCAGCATACAGATATGGATATGGAGATGCATCTCTTGCTATCTATGAAAATATGATGATGCATGGGCCATTCATGGGTGGGAGTTCAGTAGATGAATTTGGTGGTAGCAGAATAACTGAGAGAATCCATGGGACCAATAGTAACATCAATTGGACTCATATGTTCCAAGTTGATTCTTCCAATTTTGGTGAACTATCAACAAGTAAAGTCCATGAACCAAAAGATAAATTCCTCTCAATTGGTGGCCATGAATCAATATGCACACAAATCAAAATGAGCCAAGTTGATCTTCATCCATCAACCAAAGTGCATCCAAGTGCACAAGAGCTCATGCCATATAACAAATTTGCCACAAACCCAGTGGAACATAAGTCCTTGAAAAGGAAGTCTTCAGATATTAATCTTGATTTGGATCTGTCACTTAAATTAAATTCAAGGAATATCAGTGCTGAGAACCAATTAGAAAGCATGGAGGACCATGAAGTTGACAGCAATCTATCACTCTCTCTGTGTTTTCAATCCTCTTCCTCTAACCTTAGCAACAGGTTGAAAGTAGCCCAATATTGTTCCAAGAGGCAAGGGGAAAAAGCAAGTGCTTTGGATCTGACTATATGA 1095 0.3936 MNMMMEEERNDSECSKTSPSNEEGCENEGNEDENKQNNNGGSSSNSTVEENEKKTTVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDPNQVLADQRVLVDNGDRNVYNLSQIPMLQGYNPTQSSAYRYGYGDASLAIYENMMMHGPFMGGSSVDEFGGSRITERIHGTNSNINWTHMFQVDSSNFGELSTSKVHEPKDKFLSIGGHESICTQIKMSQVDLHPSTKVHPSAQELMPYNKFATNPVEHKSLKRKSSDINLDLDLSLKLNSRNISAENQLESMEDHEVDSNLSLSLCFQSSSSNLSNRLKVAQYCSKRQGEKASALDLTI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2064 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 364 IPR044848 GO:0003700
Apr4g2064 364 MobiDBLite consensus disorder prediction 34 50 - -
Apr4g2064 364 PANTHER - 10 364 - -
Apr4g2064 364 Gene3D - 65 122 - -
Apr4g2064 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 66 121 IPR006447 GO:0003677
Apr4g2064 364 Pfam Myb-like DNA-binding domain 68 118 IPR001005 -
Apr4g2064 364 MobiDBLite consensus disorder prediction 1 16 - -
Apr4g2064 364 MobiDBLite consensus disorder prediction 1 59 - -
Apr4g2064 364 SUPERFAMILY Homeodomain-like 65 120 IPR009057 -
Apr4g2064 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 122 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2064 Apr-Chr4 29462418 29464403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2064 57 122 G2-like Transcription Factor Family AT2G42660 81.818 9.49e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr4g2064 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2064 - - gsj:114395715 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2064 4 29462418 29464403 Apr4g2064 4 29462418 29464403 ECH