Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2044 ATGACTGATGCAAATGTTGCTTCATTTGAAGCATTTCTCCAAGGGTGGATGGTGCGCCAAAGAGACCACCTTAATGAGCTTATCTCAGCTCAGCAACACCTTGAGGAGCATCAAGATGCTGAGATAAGACAATTGATCAACAGGGTCCTCTGCCACTATGGTCAATACTATGAAGAAAAATCAAGGATTGCCCACCAAAATATTCTGCTTGTTTTCTCACCTACATGGTTCAGTTCATTGGAAAGAACGTTTTTTTGGGTGGGGGGGTTCAAGCCTGGAATGGCATTTGAGGTTGTGAACACAGCTCTGGAGGACTTGTCAGAAGAGCAGAGGCAGAGGTTGAGACAGCTCAACAATGAGACAAAGGTGAAAGAGAGAGCCCTCAATGATGAGTTGGCTAAGCTTCATGAGAGTTTTGCAGCTCCACCGCTTGTAGACATGGCTAGAAACTATGGAAGGGTGTGTTTAAGTAGGTCCTTCATGGCAGAAGATGATGCAGTACTACCAAGCTCTTTTAAGGAGACACTGGAGAGACTGGTGACAAATGCAGATGCTTTGAGGAGAAACACAGCATTGAAAGTTGTGCAGATTCTGAGACCAGCTCAGATTGTCACAGTCTTGATTGCTGTGGCTGAGCTTCAGCTCAGGATCAGGTCTTGGGGTTTGGATAAAGATGCTGAAAGTGGAGGCCAGGGTGAATAA 702 0.4558 MTDANVASFEAFLQGWMVRQRDHLNELISAQQHLEEHQDAEIRQLINRVLCHYGQYYEEKSRIAHQNILLVFSPTWFSSLERTFFWVGGFKPGMAFEVVNTALEDLSEEQRQRLRQLNNETKVKERALNDELAKLHESFAAPPLVDMARNYGRVCLSRSFMAEDDAVLPSSFKETLERLVTNADALRRNTALKVVQILRPAQIVTVLIAVAELQLRIRSWGLDKDAESGGQGE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2044 233 Coils Coil 100 134 - -
Apr4g2044 233 ProSiteProfiles DOG1 domain profile. 6 227 IPR025422 GO:0006351|GO:0043565
Apr4g2044 233 PANTHER - 5 229 - -
Apr4g2044 233 Pfam Seed dormancy control 23 100 IPR025422 GO:0006351|GO:0043565
Apr4g2044 233 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2044 Apr-Chr4 29268598 29269874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2044 3 219 Calmodulin-binding Proteins AT1G77920 29.817 3.90e-22 91.7