Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g2038 | ATGGGCAATTGCTGCAGATCTCCGGCCGCCGTCGCCCGCGAGGACGTCAAATCCACCTACTCCAACAACGATCACGCAAAGCGCGCCGCCGACACCGCCGGCGGCAAACACAAAGCTCCGATCACGGTGCTCGCCGGCGTGCCCAAAGAGAACATTGAAGACCGCTACCTCGTCGACCGTGAACTCGGTCGTGGAGAGTTCGGCGTCACTTATCTCTGCATAGACCGCGACACACGAGAGCTTTTGGCCTGCAAGAGCATCTCCAAACGGAAGCTCAGGACCGCCGTCGACGTCGAGGATGTGCGCCGCGAAGTTGCTATCATGCGCCACCTTCCGAAGAGCCCTAGCATCGTGTCGTTGAGGGAAGCGTGCGAAGACGACAATGCCGTTCACCTCGTCATGGAGCTCTGTGAGGGCGGTGAGCTCTTCGACCGGATCGTCGCGCGTGGACACTACACGGAGCGCGCCGCGGCTGCAGTTACGCGAACCATCGTCGAGGTCGTGCAGCTCTGCCACAAGCACGGTGTTATTCACCGTGACCTTAAGCCGGAGAATTTCTTGTTCGCTAACAAGAAGGAGAATTCGCCTCTTAAGGCTATTGATTTTGGACTCTCCATATTTTTCAAGCCAGGTGAGAGGTTCTCAGAAATTGTTGGAAGCCCATATTATATGGCTCCGGAGGTGCTCAAGCGGAATTACGGACCAGAAATAGATATATGGAGTGCAGGAGTAATTCTCTATATCTTATTGTGTGGCGTTCCCCCTTTTTGGGCTGAATCTGAGCAAGGAGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCTTGGCCCAGTATATCTGAAAGTGCTAAAAGTCTTGTTAGGCAAATGTTAGAACCAGACCCTAAGCTTCGGTTAACTGCCAAACAAGTTCTTGAGCATCCCTGGCTTCAAAATGCTAAGAAGGCTCCTAATGTTCCTCTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCACTGAGGGTTATTGCAGATTTCTTGTCCAATGAAGAAGTTGAAGACATCAAAGATATGTTCAAGAAGATGGATATTGATAATGATGGTATTGTTTCCATTGAAGAACTAAAAGCTGGATTTCGAAACTTTGGTTCCCAACTTGCTGAGTCTGAAGTTCAGATGCTTATTGAAGCTGTAGACAACAATGGTAAGGGAACACTAGACTACGGAGAATTTGTTGCTGTTTCCCTTCATTTAAAAAGGATGGCTAATGATGAGCATCTTCGCAAGGCCTTTTCCTATTTTGACAAGGATGGGAATGGATATATTGAACCAGATGAGCTACGGAATGCCTTGATGGAAGATGGAACAGATGACTGTACAGATGTGGCAAATGATATTTTCCAAGAAGTAGACACGGACAAGGATGGACGTATCAGCTATGATGAATTTGTTGCTATGATGAAAACTGGAACAGATTGGAGAAAAGCTTCTAGGCATTACTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTGATGAAAGACGGTTCTTTAAACTTAGGAAATGAGTAG | 1593 | 0.4752 | MGNCCRSPAAVAREDVKSTYSNNDHAKRAADTAGGKHKAPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPKSPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDIDNDGIVSIEELKAGFRNFGSQLAESEVQMLIEAVDNNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRNALMEDGTDDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE* | 531 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g2038 | 530 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 339 | IPR011009 | - | |
Apr4g2038 | 530 | SUPERFAMILY | EF-hand | 343 | 521 | IPR011992 | - | |
Apr4g2038 | 530 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 357 | 392 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | ProSitePatterns | EF-hand calcium-binding domain. | 478 | 490 | IPR018247 | - | |
Apr4g2038 | 530 | ProSitePatterns | EF-hand calcium-binding domain. | 370 | 382 | IPR018247 | - | |
Apr4g2038 | 530 | SMART | efh_1 | 469 | 497 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | SMART | efh_1 | 361 | 389 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | SMART | efh_1 | 397 | 425 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | SMART | efh_1 | 433 | 461 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | Gene3D | - | 323 | 498 | - | - | |
Apr4g2038 | 530 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 511 | - | - | |
Apr4g2038 | 530 | ProSitePatterns | EF-hand calcium-binding domain. | 442 | 454 | IPR018247 | - | |
Apr4g2038 | 530 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 429 | 464 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 465 | 500 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | CDD | EFh | 433 | 495 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | CDD | STKc_CAMK | 55 | 313 | - | - | |
Apr4g2038 | 530 | ProSitePatterns | Protein kinases ATP-binding region signature. | 62 | 85 | IPR017441 | GO:0005524 | |
Apr4g2038 | 530 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 176 | 188 | IPR008271 | GO:0004672|GO:0006468 | |
Apr4g2038 | 530 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 13 | 6 | 511 | - | - | |
Apr4g2038 | 530 | Gene3D | Phosphorylase Kinase; domain 1 | 57 | 141 | - | - | |
Apr4g2038 | 530 | Pfam | EF-hand domain pair | 360 | 420 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | Pfam | EF-hand domain pair | 432 | 495 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | ProSiteProfiles | Protein kinase domain profile. | 56 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2038 | 530 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 393 | 428 | IPR002048 | GO:0005509 | |
Apr4g2038 | 530 | SMART | serkin_6 | 56 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr4g2038 | 530 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 322 | - | - | |
Apr4g2038 | 530 | Pfam | Protein kinase domain | 58 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g2038 | Apr-Chr4 | 29172340 | 29181060 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g2038 | 1 | 415 | EF-hand Containing Proteins | AT3G51850 | 87.711 | 0.0 | 756 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Apr4g2038 | Pkinase | 4e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g2038 | K13412 | - | gmx:100783922 | 1007.67 |