Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2036 ATGGGTTCGAATCGCTCAGATGGTTCAGCCACTGGCAAAGAACGCTTACGATGGACACAACAACTCCATGAACGATTCGTGGAGGCTGTAGATAGACTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGAATGAAGGCTATGGGAGTTTCAGAATTAAACATTTACCACGTCAAAAGCCACTTGCAGAAATACAGGATCTCCCAACTGATTCCAGAGTCCTCCACAAGAGGAAAGCTTGAAAAGAGAAGCATATCAGATATACTGCCAAATTTTAGTTCTATATCTGCTCTTCAGCTAAAGGAAGTTCTTCAAACGCAGATGGAGGCGCAAAAACGCTTAAGTGATCAAATAGAGGTTCAAAGAAGCTTGAAGCAAAAAATTGAAGCACAAGGAAAGTATTTGGATAGAATTGGACAAAGTAATCATGGCAAAATAATCATTGGAAAAGCATGCAAGCCTTTGGTTGCTACAATTGCACCTCTGCCTCCTCTCTCTGAGGAATCTGAATCTTTGAAAACACAGCCTGAGGAAGAACATAGATCAGCCAAAAAACAAAGAATCGAAGAGGAGAGTGCTTTTCCAACAAGTTTTGAAGTTGAATCATCCATCACACAAGAATTCTACAACCAAACCTGGAATCTTTCTTGGAGTCAGCTTGCAGCAGCATGCCAATCACCTTTGGTGCCCAATTTCTTATTATAA 714 0.416 MGSNRSDGSATGKERLRWTQQLHERFVEAVDRLGGPDRATPKGILKGMKAMGVSELNIYHVKSHLQKYRISQLIPESSTRGKLEKRSISDILPNFSSISALQLKEVLQTQMEAQKRLSDQIEVQRSLKQKIEAQGKYLDRIGQSNHGKIIIGKACKPLVATIAPLPPLSEESESLKTQPEEEHRSAKKQRIEEESAFPTSFEVESSITQEFYNQTWNLSWSQLAAACQSPLVPNFLL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2036 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 204 IPR044848 GO:0003700
Apr4g2036 237 SUPERFAMILY Homeodomain-like 12 71 IPR009057 -
Apr4g2036 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Apr4g2036 237 Gene3D - 12 73 - -
Apr4g2036 237 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Apr4g2036 237 MobiDBLite consensus disorder prediction 169 197 - -
Apr4g2036 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 204 - -
Apr4g2036 237 Pfam MYB-CC type transfactor, LHEQLE motif 102 141 IPR025756 -
Apr4g2036 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Apr4g2036 237 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2036 Apr-Chr4 29141714 29145825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g2036 3 154 G2-like Transcription Factor Family AT4G28610 48.734 1.29e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr4g2036 Myb_CC_LHEQLE 6.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2036 - - pvu:PHAVU_008G103100g 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2036 4 29141714 29145825 Apr4g2036 4 29141714 29145825 ECH