Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g2033 | ATGGCGGAGCCTAATTTCACCACCGTCACTCCTCCTCCTCTCCCGTCGGTGGAAAGCGCGCCGCCGCCGCCGAGTAGCTCCCAAACTCGGTTGGTATCACGTGAGCCCCAGCACGTGAGGATTACTAGGGACGATACCTGCTCCTGCTTCGCCGTTGTCTTCAGCTTCTGGTTTTTCGTGTCGGTGACTCTTATATTGGGGGTTTATGGGTCCCTGATCGTCGAGCTTGGTCCAGAAACTTCTATTGTTTTCCAACCTAGTCCCCTGTTTGTCCAATTTGTGAAGGTAGAAAATTTAGAGGCAAAGTCAAGCCCAGGACCTATTCTTTATGGTACATATGGATATCCACCCCTTGATGTTGTTACCACTTGGGGAGTGACTCGTAATGTATCTCTTCCCTCTGGCTCGCATAAGGAATGGAAATATTATCTGAACAAAGGGTCTGAAGTAAATATTTCGTATCACGTGAGCTCTACGAGCTCTTTTGTTTTCCTTATAATTGCAGATGGGTTGGACAGCCTCACTCAGTGGCTAGAGAACCCAACATATCCTAATATAACTCTGTCATGGAACATGATCCATGGAATTGGTATTATTTCACAGGAAATATTCTGGTCATCGAGCTATTATGTGGCAGTGGGTAATTTGGATGAGGAGGTGGAGGTGGAATTAAACCTCAGTGTAAAGGCCTTTTTGCATAATACAACGAACGCATACTACAAATGTTCTCTGACTAGTAGTCCATGCAGTTTGAATATTTTTTTTCCAGATGGAAATGCAGCTGTGCTAGTTTCTCCAGGTCCACAACAGGAGAACGCATCCAATGAGTGGTCTGTCAAAGTGTCCTATGGACCAAGATGGGTGACCTATATTTTTGGCATAGCTGGAATGACTTTGCTTATGTTATGGGCCTTCAACCACTTGAACACGCTGCAGTGTGCCCAAGAAGATAGAGTGGGAGTTACAATTGAGGAAATAGCACCTCAAAGAGCCCCTTTGCTTTCTCGTAAAGATGATGATCTCTCAAGTTGGGGTTCATCATATGATTCATTGCCACAGGATGAGGAGGATCTTGAATTTCTCCCAGGAGGTTCCATTGATGGGAAGTTTTCAGGTAATGGTGAAACCAGTAATAATACCCGGCGTCTTTGTGGAATTTGCTTTGATGCTCCAAGGGACTGCTTCTTCCTTCCATGTGGGCACTGTGTCGCTTGTTTTGCATGTGGAACTAGGATAGTCGAGGCAGCTGGTACCTGCCCTGTTTGTCGAAGGAAAATGAAGAAGGTGAGAATGATTTTTACTGTCTGA | 1308 | 0.4549 | MAEPNFTTVTPPPLPSVESAPPPPSSSQTRLVSREPQHVRITRDDTCSCFAVVFSFWFFVSVTLILGVYGSLIVELGPETSIVFQPSPLFVQFVKVENLEAKSSPGPILYGTYGYPPLDVVTTWGVTRNVSLPSGSHKEWKYYLNKGSEVNISYHVSSTSSFVFLIIADGLDSLTQWLENPTYPNITLSWNMIHGIGIISQEIFWSSSYYVAVGNLDEEVEVELNLSVKAFLHNTTNAYYKCSLTSSPCSLNIFFPDGNAAVLVSPGPQQENASNEWSVKVSYGPRWVTYIFGIAGMTLLMLWAFNHLNTLQCAQEDRVGVTIEEIAPQRAPLLSRKDDDLSSWGSSYDSLPQDEEDLEFLPGGSIDGKFSGNGETSNNTRRLCGICFDAPRDCFFLPCGHCVACFACGTRIVEAAGTCPVCRRKMKKVRMIFTV* | 436 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g2033 | 435 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Apr4g2033 | 435 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 372 | 434 | IPR013083 | - | |
Apr4g2033 | 435 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE APD1-RELATED | 31 | 435 | - | - | |
Apr4g2033 | 435 | Pfam | Domain of unknown function (DUF4793) | 199 | 303 | IPR032010 | - | |
Apr4g2033 | 435 | Pfam | Zinc finger, C3HC4 type (RING finger) | 381 | 429 | - | - | |
Apr4g2033 | 435 | PANTHER | OS05G0521000 PROTEIN | 31 | 435 | IPR044586 | GO:0004842 | |
Apr4g2033 | 435 | Pfam | Domain of unknown function (DUF4792) | 106 | 174 | IPR032008 | - | |
Apr4g2033 | 435 | MobiDBLite | consensus disorder prediction | 337 | 356 | - | - | |
Apr4g2033 | 435 | ProSiteProfiles | Zinc finger RING-type profile. | 384 | 423 | IPR001841 | - | |
Apr4g2033 | 435 | MobiDBLite | consensus disorder prediction | 8 | 22 | - | - | |
Apr4g2033 | 435 | SUPERFAMILY | RING/U-box | 383 | 429 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g2033 | 357 | 432 | C3H Transcription Factor Family | AT3G06140 | 30.263 | 4.65e-06 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g2033 | - | - | gmx:100791057 | 638.262 |