Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1960 ATGGATATGCCTTTAGGCCAAGACATGCCTATGTCAAATTGCACAAACATGATGATGAAGATGCAGATGAGCTTCTACTGGGGCAAAGATGCCATAGTGCTGTTCTCTGGGTGGCCTAAACACAGTGTTGGCATGTACATCTTTGCTATAATTTTTGTGTTCTTCCTAGCTTTGGTTAGTGAAGTTTTATCTAACCAACCACTCATCAAACGTGGCACTAGTCCCCTTATGGGGGGGCTGATTCAAGCAATTGTGTACTTATTTCGCATCAGTTTCACTTATTTGGTGATGCTTGCAGTTATGTCCTTCAACGTGGGAATCTTCATAGCTGCTGTGGTTGGACATTCCTTGGGTTTCTTCATTGCCAAGACTCGTGCTCTTGCCATTGCCAATAGTGATGATAAAAGGTCTTCCTCCATTAGAAACAATGTTTGA 435 0.4253 MDMPLGQDMPMSNCTNMMMKMQMSFYWGKDAIVLFSGWPKHSVGMYIFAIIFVFFLALVSEVLSNQPLIKRGTSPLMGGLIQAIVYLFRISFTYLVMLAVMSFNVGIFIAAVVGHSLGFFIAKTRALAIANSDDKRSSSIRNNV* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1960 144 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 138 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr4g1960 144 Pfam Ctr copper transporter family 23 64 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr4g1960 144 Pfam Ctr copper transporter family 75 121 IPR007274 GO:0005375|GO:0016021|GO:0035434
Apr4g1960 144 PANTHER CTR FAMILY COPPER TRANSPORTER 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1960 Apr-Chr4 28015247 28015681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1960 24 140 Inorganic Solute Cotransporters AT5G59030 45.833 1.46e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1960 K14686 - gmx:100813144 196.052