Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1958 ATGGCTGAAAATCTTGGAGAGGTGAAGCTTTTGGGAGTTGTGGGAAGCCCATTTGTTTGCAGGGTTCAGATTGCCCTTAAGTTGAAAGGAGTTGAATACGAATTTATTGAAGAGAATTTGGCAAATAAGAGTGATCTGCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTGTTTGTTCACAATGGGAAACCCATATCAGAGTCCCTTGTGATTGTCGAGTACATTGATGAGACTTGGAAAAACAACCCCATCTTGCCCTCTGAACCATACCAAAGAGCATTGGCCCGTTTCTGGTCCAAGTTCATTGATGACAAGATTGTGGGTGCTGCATGGAAAGCTGTTTTCACCGCTGATGAGAAGGAGCGTGAGAAGAATTTGGAAGAATCATCTGAGGCTCTGCAATTTCTTGAGAACGAGCTGAAGGACAAGAAGTTCTTTGGAGGAGAGGAGTTTGGCTTGGTGGACATTGCTGCTGTCTTCATAGCATTTTGGATTCCTTTGATTCAAGACATAGCAGGGTTGAAGATATTCACTAGTGAGAAATTTCCTAAGCTCTACAATTGGAGCCAAGAATTTCTCAACCATTCAGTTGTCAAAGAAGTCGTTCCTCCTAGAGACCCACTTTTTGCCTTTTTCAAAGGTCGCTATGAAAGCCTTACGGCTTCAAAATAG 678 0.4277 MAENLGEVKLLGVVGSPFVCRVQIALKLKGVEYEFIEENLANKSDLLLKYNPVYKKVPVFVHNGKPISESLVIVEYIDETWKNNPILPSEPYQRALARFWSKFIDDKIVGAAWKAVFTADEKEREKNLEESSEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPLIQDIAGLKIFTSEKFPKLYNWSQEFLNHSVVKEVVPPRDPLFAFFKGRYESLTASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1958 225 CDD GST_N_Tau 8 81 - -
Apr4g1958 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Apr4g1958 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Apr4g1958 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Apr4g1958 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Apr4g1958 225 SFLD Glutathione Transferase (cytosolic) 6 223 IPR040079 -
Apr4g1958 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Apr4g1958 225 SFLD Main.3: Omega- and Tau-like 6 223 IPR045073 -
Apr4g1958 225 Gene3D Glutaredoxin 1 89 - -
Apr4g1958 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Apr4g1958 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Apr4g1958 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 221 - -
Apr4g1958 225 Gene3D - 90 225 - -
Apr4g1958 225 Pfam Glutathione S-transferase, C-terminal domain 107 196 IPR004046 -
Apr4g1958 225 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1958 Apr-Chr4 27945399 27947092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1958 7 224 Glutathione S-transferase Gene Family AT3G09270 53.182 4.38e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1958 K00799 - gmx:100500680 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1958 4 27945399 27947092 Apr4g1958 4 27945399 27947092 ECH