Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1957 ATGGCTACTTATGAAGAAGAGGTGACACTTTTCGGGGTTGTGGGAAGCCCATTTGTGTGCAGGGTTCAGATTGCTCTCAGATTAAAGGGAGTTGAATACAAATATGTGGAAGATGATTTGAACAAGAAGAGTGATATGCTCCTCAAATACAACCCAGTTTACAAAATGGTTCCTGTGTTTGTTCACAATCAGAAGCCCATATCAGAGTCCCTTGTGATTGTTGAATACGTTGATGAGATCTGGAAACACAACCCCATCTTGCCTTCTGATTCTTACCAACGAGCCATGGCCCGTTTCTGGTCCAAGTTCATTGATGATAAGTGCGTTGCTCCTGCATGGAAATCAGTTTTTATAGTTGACGAGAAAGAGCGTGAGAAAGCAGCTGAAGAATTAAATGAAGCTCTCAAGTTTCTTGAGGATGAGCTAAAGGACAAGTTCTTTGGAGGAGATGAGTTTGGCTTTGTGGATATTGCAGCGGTTTTCATACCTATAGTTCAAGAGGTTGCGGGGATGCAATTGTTCAGCAGTGAAAATTTTCCCAAACTCTATAAATGGAGCAAAGACTTTCACAACCATCCAATTGTCAAAGAATGTCTACCTCCTAAGGACCAACTTTTTGCCTATTTCAAGGCTCGTGCTCAAAGCCTTGCTGCTCGAAAATAA 663 0.4178 MATYEEEVTLFGVVGSPFVCRVQIALRLKGVEYKYVEDDLNKKSDMLLKYNPVYKMVPVFVHNQKPISESLVIVEYVDEIWKHNPILPSDSYQRAMARFWSKFIDDKCVAPAWKSVFIVDEKEREKAAEELNEALKFLEDELKDKFFGGDEFGFVDIAAVFIPIVQEVAGMQLFSSENFPKLYKWSKDFHNHPIVKECLPPKDQLFAYFKARAQSLAARK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1957 220 CDD GST_N_Tau 8 81 - -
Apr4g1957 220 SFLD Main.3: Omega- and Tau-like 5 219 IPR045073 -
Apr4g1957 220 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Apr4g1957 220 SUPERFAMILY GST C-terminal domain-like 79 214 IPR036282 -
Apr4g1957 220 Gene3D Glutaredoxin 1 89 - -
Apr4g1957 220 SFLD Main (cytGST) 5 219 - -
Apr4g1957 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 209 IPR010987 -
Apr4g1957 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
Apr4g1957 220 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 215 - -
Apr4g1957 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Apr4g1957 220 CDD GST_C_Tau 92 212 IPR045074 GO:0004364|GO:0006749
Apr4g1957 220 Pfam Glutathione S-transferase, C-terminal domain 120 193 IPR004046 -
Apr4g1957 220 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Apr4g1957 220 Coils Coil 121 141 - -
Apr4g1957 220 Gene3D - 90 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1957 Apr-Chr4 27928265 27929362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1957 6 216 Glutathione S-transferase Gene Family AT2G29420 47.685 2.32e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1957 K00799 - gmx:548029 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1957 4 27928265 27929362 Apr4g1957 4 27928265 27929362 ECH