Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1938 ATGGACCCACATAAAATTACAACGTTAATATTATCAATATCTGTAGCATTGTTGCTATCATACGCCACGGCGGTGCGGCAGTGCCGGAAGTGTGGTCCGAACCCGGTTCCTTACCCGTTAAGCACTGCACCCGATTGTGGTGACCCAGGGTACAACATCCGGTGCACCGCGGGTACACTCTGGTTTGATGCACTTGGTGGATCATCCTACATGATCCGGTCCATTGATCCATTAACCCGTCGGATCGTAATCAAACCCGCTGCACTTGCGGGAAGCGCGTGCGTGTCTACGGACTTCCGCAGCGAAGGAATGTACCTAAATGAGACCCTTCTTTTTAGCATTGCCGCAGGCAACACCATATTTCTGTTCAATTGCACTGACAACGCGCCACACGCGCCTCCGATGGACTGTTCGGCAAGTAACCTGTGCCACAGCTACATCACGGACCACGCGAAAGCAGGCGCGTGCGGGCGCGTGAACATTTGCTGCGGGTACAAGACGGGTGGGGTCCTTAAAGAGTATGTGGTCAGGGTACACAGCGGAGGGTGCGCGGCGTATCAGAGTTTCGTGGATTTTAATGCCACGGTGGCGCCACCTGGAACGCGGTGGCCGGAGCCCGGGTTAGGGATTGAGTGGGTGGCACCACAGGAACCGGTTTGTAAGGGGCCAATGGATTGCAACGAATTGTTGAACTCAAAGTGTGGAGTGGGCCCCAGTGGTGGTGTGCAAAGGTGCTTCTGCAATGCTGGCTTTAAGTGGGACTCTATCAATGGTTCGTGTCAACCTCAAATTCAAAGACATGGGAAAGACATCCACTGCAAAGTTCGAAAGAAAAAGAAAATGCTTCTAGCTGTGGTTGTTGCGTTAGGTGGAATGGTCTCCATTATAACAGTACTAGGAGCCATTTTCTATAAGAAGCATAATCAAGCAAAGATAAAAACCAAGGAGACCAAAATCAAAAGGAGGAAAGAAATCTCAAGTGCCAAAGCCAATGCTTTATCATCAAGAATCTTCACAGGCAGAGAGATAAAGAAGGCAACCAACAATTTCTCCCCAGAAAACCTCATTGGCTCAGGTGGTTTTGGAGAAGTGTTCAAGGGAACATTTGATGATGGAACAACCATTGCCATCAAGCGTGCCAAGCTGGGAAACACCAAAGGCATTGATCAAATGCAAAACGAGGTTCGAATACTTTGCCAAGTGAACCATAGAAGCCTAGTGAGACTCCTTGGTTGTTGCTTAGAACTTGAGCACCCTTTACTAATATATGAATATATCTCTAATGGGACACTCTTTGATTACCTTCATCGCCACTCTTTGGGCACAAGGGAACCTCTCAAATGGCATCAAAGACTCAAAATTGCACACCAAACAGCTGAAGGTCTTTCCTATTTGCATTCTGCAGCTGTTCCACCCATTTACCACCGTGATGTGAAATCAAGCAATATTCTCCTTGATGACAAGCTTGATGCAAAAGTTTCTGACTTTGGGTTATCTAGGCTTGTTGAATTAGCTGAAGAAAATAAAAGCCATATTTTCACGAGTGCTCAGGGAACACTTGGTTATCTAGACCCTGAGTATTACCGTAACTTTCAATTGACAGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGCTGATGGAGCTGCTAACTGCTCAGAAAGCTATTGATTTCAACAGGGAAGAAGAGAATGTGAACTTGGCAGTGTATGCCAAGAAGAAAATGTTTGAAGACATGTTGATGGATGTGGTTGATCCTTTACTTAAAGAGGGTGCTTGCAATTTAGAATTGGAAACTATGAAGTCATTGGGGTATCTTGCAGCTGCGTGCTTGGATGATCAGAGGCAGAAAAGGCCTTCGATGAAAGAAGTTGCAGATGAGATTGAATACCTTATTAAAATTGTTAAAGTCCCGTCCTATAAGGATAAAGTGATAGGGCTCAAAGAGATAGGTCTAGTGCTAAATGTTAAGAATATGCCAAAATCAATACTGGAAGACTGTAATATAATTCCTGAATATGAAGAAAAGGTTGGTGCTTACTTGAGGTCTATGGTAAAAGTAGATTCCTACACTTCCCTTCTTTTTAAGGGAAAGATTGCTAGAATTTGTGTTGGAATAGACCTTAGGAGCAAACTAGTCCCTACTTTTAAGGTTTTAGGACAAGAATTTAAGGTTGAGCATGAAGGATTGCATTTGATTTGCTTTAGTTGTAGTAAGTATGGCTATAGACAGGAGCAATGTATAAAAGATATTGGTCATGATTTCCCTGAGATAGAGAAAGGGGAGAGCAATAATAATAGCTCTATAAACAGTGAAGGGATGTTAGGAAAGAATCTTTATGAAAGAAAGGATATGGTTATAGACTACCCTAAGATTGAGTCTGGGTTAAAGGATGACCATTTTGGTCCTTGGATGAGTGCCATTGTGAGGAAAGAGAATAAATCCAGAACTACTTCTACTGGGGTTAAAGTGGGAATGGATGTAGAGAAAAGCCTACAACAGGATAGGAATTTAGGCCATCGTATACAGGATCTCATTGGCCTAAACTCTAATTTCCTTTGGAAGGATCAGGACACCAGTATCAAATTCCTTCTTGATAAACCACTTGATCCTCCTTTAATAATGAAACTTGATAAAATAGATGACAATGTTAACTCTAAGTCTGAAATTATTTCATTGGATAATAGTAATGCAGGGTTATCCCAGCATCCGGAAGATGCTGCTCACTTCCTTTCTTAA 2739 0.4334 MDPHKITTLILSISVALLLSYATAVRQCRKCGPNPVPYPLSTAPDCGDPGYNIRCTAGTLWFDALGGSSYMIRSIDPLTRRIVIKPAALAGSACVSTDFRSEGMYLNETLLFSIAAGNTIFLFNCTDNAPHAPPMDCSASNLCHSYITDHAKAGACGRVNICCGYKTGGVLKEYVVRVHSGGCAAYQSFVDFNATVAPPGTRWPEPGLGIEWVAPQEPVCKGPMDCNELLNSKCGVGPSGGVQRCFCNAGFKWDSINGSCQPQIQRHGKDIHCKVRKKKKMLLAVVVALGGMVSIITVLGAIFYKKHNQAKIKTKETKIKRRKEISSAKANALSSRIFTGREIKKATNNFSPENLIGSGGFGEVFKGTFDDGTTIAIKRAKLGNTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYISNGTLFDYLHRHSLGTREPLKWHQRLKIAHQTAEGLSYLHSAAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEENVNLAVYAKKKMFEDMLMDVVDPLLKEGACNLELETMKSLGYLAAACLDDQRQKRPSMKEVADEIEYLIKIVKVPSYKDKVIGLKEIGLVLNVKNMPKSILEDCNIIPEYEEKVGAYLRSMVKVDSYTSLLFKGKIARICVGIDLRSKLVPTFKVLGQEFKVEHEGLHLICFSCSKYGYRQEQCIKDIGHDFPEIEKGESNNNSSINSEGMLGKNLYERKDMVIDYPKIESGLKDDHFGPWMSAIVRKENKSRTTSTGVKVGMDVEKSLQQDRNLGHRIQDLIGLNSNFLWKDQDTSIKFLLDKPLDPPLIMKLDKIDDNVNSKSEIISLDNSNAGLSQHPEDAAHFLS* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1938 912 CDD STKc_IRAK 356 629 - -
Apr4g1938 912 Gene3D Transferase(Phosphotransferase) domain 1 426 643 - -
Apr4g1938 912 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Apr4g1938 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Apr4g1938 912 SMART serkin_6 350 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1938 912 Gene3D Phosphorylase Kinase; domain 1 308 425 - -
Apr4g1938 912 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 17 637 - -
Apr4g1938 912 SUPERFAMILY Protein kinase-like (PK-like) 325 627 IPR011009 -
Apr4g1938 912 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 637 IPR045274 GO:0007166
Apr4g1938 912 Pfam Protein tyrosine and serine/threonine kinase 354 627 IPR001245 GO:0004672|GO:0006468
Apr4g1938 912 ProSiteProfiles Protein kinase domain profile. 350 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1938 Apr-Chr4 27554869 27561131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1938 27 635 Receptor kinase-like Gene Family AT5G02070 58.252 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr4g1938 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1938 - - aprc:113862410 1792.32