Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1937 ATGAGGATCATAAATCTCTCTCTTTTGGTCTTCACAGTTACAACAATGCTCCCCCTATCATTCTCCATCAATGCTTTCAAACGCTGTCCAAATTGTGGCCAAGCCCAAGTGCCATACCCATTAAGCACTGCCGCAAATTGCGGTGACCAATCCTACAAGATTCGTTGCACCGCTGGCACACTCTTCTTCGACTCCATCAACGGTTCCTCTTACGCCATCACCGCCATCAACCCCACGACGCAACGTTTCGTTCTCCACCCACCAAGTTTCTTGAACGACACTTGCGTTTCCACCGACTTCAAAAGCGAAGGGTTGTGGCTAGACACTAGCTCCCCCTTCAACATCACCTCTAGCAACACCCTGGTCTTCTTGAACTGCAATCAAGACGTCTTTACGACATTGTGGAATTGCTCGTTATCTAGCATTTGCCACAAGTACGTGCAAGACAATGACGTGGCAGCAAAAATCTGTGGGACAAGCAACCGTGTATCGCCGATATGCTGCCACGTCAAAACTGGTGGGTCAGTCACTGCTTATAGAATAAGGGTGAGGAAGGAACGGTGTGCGGCGTATGTTAGCTTTCCCAATTTGGATTATTCTTTGCCTGTGAGTATGTGGCAGCCTGGGGTGGAGATAGAGTGGGAGTTGCCGGAGGAACCGCTGTGTAAAGTGAATGAAGATTGCTTGGATTTGGCTAACTCTGGTTGTTTGCCGGATCCGGTGACCGGCGGATGGAGGAAGTGCTTGTGCAAACCTGGCTTTCACTGGGATCCTGTAAACGGCATATGTCAAAATATCAAGTGCGAAAATGGAAGAGGATGCAATCGTCGTAAGAAGAAAACTCCTCTTACCGGAGGCATGGCGTTGGTTGGGGCTGCCACGCTAACAGGAGGCTTGATTTTTGCTTTGATGTTTTACCTTCGGAAGCAAAGAATCAAAAGAGAAACTCAGAAGAGCATCATAAGGAAAGCACGCAACATATTAAGTGCTGACAGCAGTGGCAAATCAGCGAAGATATTCACCATTAAAGACATCACAAAGGCAACCAACAACTTCTCCAAAGGTAACCTCCTTGGTGCTGGTGGCTTTGGTGAGGTCTTCAAAGGAACTCTTGATGATGGAACCATCACAGCTATCAAGAGAGCCAAACCTGGCAACACAAGAGGCATTGACCAAATACTCAATGAGGTTAGAATCCTTTGCCAATTAAACCATAGGAGCCTTGTGAGACTCTTGGGGTGTTGTGTTGAGCTTCCTGAACCTCTTCTTATATATGAATATGTCCCAAATGGAACCCTTTTTGAGCACCTTCATAATACCAACTCTGGCAAATGGATCCGTCTTGGATGGCATTCAAGGCTGAGAATTGCACACCAAACTGCTGAAGGGGTTGCATATCTTCACAATGCATCTATACCAAGAATCTTTCATAGAGATATCAAGTCGAGTAATATTCTTTTGAATGATAACCTTGATGCCAAAGTTTCTGATTTTGGCCTTTCAAGGTTGGCTGTGAGTGAAGCAAGTCACATCACAACGTGTGCTCAAGGAACCTTAGGGTATCTTGACCCTGAATATTATGTGAACTTTCAGCTTACAGATAAAAGTGATGTGTACAGCTTTGGGGTGGTTTTGTTGGAGTTGTTAACTTCTAAGAAGGCTATTGATTTTAACAGAGAAGAGGAGGATGTGAACTTGGTGGTTCTAATCAAAAGGGCTTTGAAGGAAGGGAGGTTGATGGATGCAGTTGATCCTATGCTGAAAAATGGAGCTAGTAGAGTGGAGTTGGAGAGTATGAAAGCATTCGGATCTCTTGCTGTTGCTTGCCTAGATGATCGGAGGCAGAATAGACCCTCAATGAAAGATGTCGCTGATGAGATTGAGTACATTATTTGTGTTGTCGCTAATGTTAAGGTTGAGGATGTTGAGGCTTAA 1935 0.4522 MRIINLSLLVFTVTTMLPLSFSINAFKRCPNCGQAQVPYPLSTAANCGDQSYKIRCTAGTLFFDSINGSSYAITAINPTTQRFVLHPPSFLNDTCVSTDFKSEGLWLDTSSPFNITSSNTLVFLNCNQDVFTTLWNCSLSSICHKYVQDNDVAAKICGTSNRVSPICCHVKTGGSVTAYRIRVRKERCAAYVSFPNLDYSLPVSMWQPGVEIEWELPEEPLCKVNEDCLDLANSGCLPDPVTGGWRKCLCKPGFHWDPVNGICQNIKCENGRGCNRRKKKTPLTGGMALVGAATLTGGLIFALMFYLRKQRIKRETQKSIIRKARNILSADSSGKSAKIFTIKDITKATNNFSKGNLLGAGGFGEVFKGTLDDGTITAIKRAKPGNTRGIDQILNEVRILCQLNHRSLVRLLGCCVELPEPLLIYEYVPNGTLFEHLHNTNSGKWIRLGWHSRLRIAHQTAEGVAYLHNASIPRIFHRDIKSSNILLNDNLDAKVSDFGLSRLAVSEASHITTCAQGTLGYLDPEYYVNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEEDVNLVVLIKRALKEGRLMDAVDPMLKNGASRVELESMKAFGSLAVACLDDRRQNRPSMKDVADEIEYIICVVANVKVEDVEA* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1937 644 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 19 636 - -
Apr4g1937 644 SMART serkin_6 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1937 644 Pfam Protein kinase domain 353 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1937 644 SUPERFAMILY Protein kinase-like (PK-like) 330 627 IPR011009 -
Apr4g1937 644 Pfam Wall-associated receptor kinase galacturonan-binding 29 85 IPR025287 GO:0030247
Apr4g1937 644 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 636 IPR045274 GO:0007166
Apr4g1937 644 ProSiteProfiles Protein kinase domain profile. 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1937 644 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Apr4g1937 644 Gene3D Transferase(Phosphotransferase) domain 1 428 639 - -
Apr4g1937 644 CDD STKc_IRAK 358 628 - -
Apr4g1937 644 Gene3D Phosphorylase Kinase; domain 1 312 427 - -
Apr4g1937 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1937 Apr-Chr4 27529686 27534107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1937 28 640 Receptor kinase-like Gene Family AT5G02070 55.200 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr4g1937 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1937 - - gmx:100775709 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1937 4 27529686 27534107 Apr4g1937 4 27529686 27534107 ECH