Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1935 ATGGAAGCCACTTCTATAACGCAGTTGTTGAAGGGCTTTTGTGATAATACACTTTGGAAATATGCTGTTTTGTGGAAGCTTGACCACCATTTTCCAATGGTTGTTGGCAAAATAGCTCTTGCCAGAGATCATTGTTGGTTTTCCTGTGAGGATATTCTCACTGGTAAATTTGACACTGATTTATTCCCTGAGTGTCCTGATGAGTGGCTTCTTCAATTTGCATCTGGCATCAAGACAATTGTGCTGGTACCAGTTCATCCACTAGGGGTTTTGCAGTTTGGTTCATTTGAAGAGATTGCAGAAGACCTGGAATTTATTACCAATATCAAGGATAAAGTCCATTCCATTCATTGTCCAGAAGCAAATACTGCACCTTTGAACTTGGGAACTGATTATCGAGATTGGTCATTCTCAACCCTAATGCATAATTTGATGGATATCTTGAACGAATCATCATCTGTTACAGATAGTATATTGAAAAGTGAGGTTTCAACTAGTGCTACACTCAATGTGAATGGTTCAAGGTTGAATCCGACAATGCTGTCATTTATTCAGGGCGACTGTTTCTTGTCTGGAGAAAATCTGGTAAAATCTCTGAAACGAGCAAATGAAAGTGTTATAGGTTCTTCATCAATTGAGATGTTGATTGATTCAAAACATGTTGGTAAGATAGAGGCAAACCCATGTCATATGGAAGAAGAGATATGGTCCTGGTCTCATTTGGTTAACAATGTGGGAGTGTTTGGCGAGATGTCATATGAATTTGGCTCTCACATGGGTAAAAATATGACGGGGAAAAAATTTGGAAGCACTGAAACTGATCATGGTGTTAAGAATGTGAATGACTTCTTCAATTTTCCCTTAGAGTCTGAATTGCACAAAGCACTTGGAACAGTTGCATACGGAGAGACAGGCAAACATATGTCAAAACATATCTCTGTGGAGGATACATACAGTAGCTCAACTTTGATATCCAATGAAAAAGAGCATGGTAATATTAAAGGTTTGGAGCTTTCCAAAGAAGTTGATCCAGAATATCTTTTGGATGCTGTTGTTGGCAGTTTATGCAGTGCCTCTGATGATACTTCAAGCTTATGTAACAGTGTTAGGTCTCTTATATCCATGCCAATAAAGTTTACAGGTTGCATTCAGCCAAAAATTAATTCAGAAGAAAGCACTTTGATTGTTGAAAATTCAGATATGAAAACAGATAATATGCCTGCAGTTATGATCAAGGGCAAAGATGAACGTTCTCACACTTATACATCATCTTTTGATGAAAATTCAAGCTTATTGGTTCATGAGGCACGGCAGGAAAAGGTTAGTAGTCATATGCAGCCTGTTAGTGGACCAAAGCCCTCTAGCGCAAGCAAGAAGAGAACAAGAGTTGGTAATAACCAAAAGTCAAGGCCAAGAGATAGACAACTAATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGTAAGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTATACTTGAGAAAGATAACAAGCCAGGCCGAGAAACTGAAACAATTTGCCAATCGGGAGGTTCCTAAATGCAAAAGGCAGAAAATCAACGGCAGCCACCCAGGAAGGAGCTGCGCATTTGACTTTGAAAGTGAACTAGCATGGCCCATAGTCATAGAAGATCTGGAATGCTCAGGGAACATGCTCATAGAGATGATATGCAACGAGCATGGGCTTTTCTTAGAGATTGCTCAGGTGATCCGAAAGCTTGACCTTTCCATCTTGAAAGGGATTTTAGAAAACCGTTCAAGCACCAACTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTTTATGTCCTTTACTGCATCTTCTGCAACTTAGAAGAAAGCCTGTATCGTATAATAGCTGA 1929 0.3981 MEATSITQLLKGFCDNTLWKYAVLWKLDHHFPMVVGKIALARDHCWFSCEDILTGKFDTDLFPECPDEWLLQFASGIKTIVLVPVHPLGVLQFGSFEEIAEDLEFITNIKDKVHSIHCPEANTAPLNLGTDYRDWSFSTLMHNLMDILNESSSVTDSILKSEVSTSATLNVNGSRLNPTMLSFIQGDCFLSGENLVKSLKRANESVIGSSSIEMLIDSKHVGKIEANPCHMEEEIWSWSHLVNNVGVFGEMSYEFGSHMGKNMTGKKFGSTETDHGVKNVNDFFNFPLESELHKALGTVAYGETGKHMSKHISVEDTYSSSTLISNEKEHGNIKGLELSKEVDPEYLLDAVVGSLCSASDDTSSLCNSVRSLISMPIKFTGCIQPKINSEESTLIVENSDMKTDNMPAVMIKGKDERSHTYTSSFDENSSLLVHEARQEKVSSHMQPVSGPKPSSASKKRTRVGNNQKSRPRDRQLIMDRMKELRELVPDGGKCSIDNLLERTIKHMLYLRKITSQAEKLKQFANREVPKCKRQKINGSHPGRSCAFDFESELAWPIVIEDLECSGNMLIEMICNEHGLFLEIAQVIRKLDLSILKGILENRSSTNWACFIVEVPRGFHRMDVLCPLLHLLQLRRKPVSYNS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1935 642 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 34 640 - -
Apr4g1935 642 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 34 - -
Apr4g1935 642 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 461 510 IPR011598 GO:0046983
Apr4g1935 642 MobiDBLite consensus disorder prediction 442 462 - -
Apr4g1935 642 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 34 IPR043561 GO:0003700|GO:0006355
Apr4g1935 642 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 34 640 IPR043561 GO:0003700|GO:0006355
Apr4g1935 642 MobiDBLite consensus disorder prediction 436 474 - -
Apr4g1935 642 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 111 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1935 Apr-Chr4 27479081 27485144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1935 290 632 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 35.714 1.13e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1935 - - aprc:113862780 1217.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1935 4 27479081 27485144 Apr4g1935 4 27479081 27485144 ECH