Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g1928 | ATGTCTTATTTCTATTTCCCCTTTACTTGCCAAAAAAAGATGGACTTCAATACCCAAAACTCTAACAAATCTGAGATAAGGTGGAATTCAGATGATCAAGGTGGTCATGGACAAGTTAAATCTTATTCTTGTAACTTTTGCAAAAGAGGGTTCTCAAATGCACAAGCACTAGGAGGCCACATGAATATTCATAGAAGAGATAGAGCCAAGTTGAAGCAGTCTTGTGAAGAAAACTTGCTTTCCTTGGACATCTCAATCAAGACCACTATTGATCATAATGACCCTGTTAATTTGGAAGAGAAAATTTTGTTTGGTTTGGATTCTGGTGAAGAGAAGCATGCTAGGAATCATAAAAAGCCTTTCACTTTTCCTAACAAAGATGATCATGCACACCAAAGGGCCATGTTAGAAATTCCTCATATTCCTTCATTTGTTTTGGGGCAGAGGATTGAAGAGAAGAAAGCTGATTTAGACCTTGAGCTTAGGTTAGGAATTGAGCCGCAGAAGTCACCAACATTCAACACTCGAGCGTTCTTTTGA | 540 | 0.3815 | MSYFYFPFTCQKKMDFNTQNSNKSEIRWNSDDQGGHGQVKSYSCNFCKRGFSNAQALGGHMNIHRRDRAKLKQSCEENLLSLDISIKTTIDHNDPVNLEEKILFGLDSGEEKHARNHKKPFTFPNKDDHAHQRAMLEIPHIPSFVLGQRIEEKKADLDLELRLGIEPQKSPTFNTRAFF* | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g1928 | 179 | PANTHER | OS07G0101800 PROTEIN | 80 | 168 | - | - | |
Apr4g1928 | 179 | PANTHER | OS07G0101800 PROTEIN | 3 | 76 | - | - | |
Apr4g1928 | 179 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 42 | 69 | IPR013087 | - | |
Apr4g1928 | 179 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 44 | 64 | IPR013087 | - | |
Apr4g1928 | 179 | Gene3D | Classic Zinc Finger | 16 | 94 | - | - | |
Apr4g1928 | 179 | PANTHER | C2H2 AND C2HC ZINC FINGER PROTEIN | 3 | 76 | - | - | |
Apr4g1928 | 179 | PANTHER | C2H2 AND C2HC ZINC FINGER PROTEIN | 80 | 168 | - | - | |
Apr4g1928 | 179 | SUPERFAMILY | beta-beta-alpha zinc fingers | 40 | 68 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g1928 | Apr-Chr4 | 27370307 | 27370846 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g1928 | 38 | 172 | C2H2 Transcription Factor Family | AT3G53820 | 36.296 | 1.91e-17 | 73.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Apr4g1928 | None | None | None |