Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1924 ATGTCTTTCAAGTTTGTAGCAATGGTATTTTTGCTGGTAACAGTGATAGCTTGTGAAGATACCAGTTTCACCTATGATGGGTTCCAATCATCTCATTTGTATCTTGATGGTAATTCTGAGCTCACCACCAATGGCTTGCTTAAACTCACCAATGCCACCAAGCAACAAAAGGGTCATGCTTTCTACCCAAATCCTATAGTTTTCAAAAACACCTCAAATGGAATTGTGTCTTCATTCTCCTCTACTTTTGTGTTTGCCATAAGATCAGAGTATCCCAATTTGGGTGGTCATGGGATTGTTTTTGTGGTTTCCCCAACAAAAGGACTTCCAGATTCTCTGCAAAGCCAGTACCTTGGTCTATTCAATGAGACTAACAACGGTAACAGCAGCAACAATGTGTTTGGTGTTGAACTTGATACCATTCTGAACAGCGAGTTTTCTGATATCAATGACAACCATGTTGGAATTGACATCAATGGATTGCAGTCAACTAAATCAGCTGCTGCAGGGTATTATAGTAATGGTGCGTTTAAGAATTTGAGCCTTATTAGTGGCTACCCCATGCAAGTATGGGTGGAATATGATGGGATAAAAAAACAGATTGATGTTACTTTAGCTCCAATCAACATGGATAAACCACAAAGTCCTCTGTTATCATTGACTAAAGATCTTTCTCCAATTCTGAACAGTAGCATGTATGTTGGATTCTCATCCTCAACTGGGTCAGTCCTAACTTCCCATTATGTTCTTGGTTGGAGCTTTAAGGTCAATGGCCAAGCTCAACAACTTGTAACCTGTGAACTCCCTCAGCTACCAAGACTAGGTAATAAAGAAGAGTCTAGGGTTTTAATTGTTGGGTTGCCTTTGATATCACTCAGTTTGGTTCTTATGGTAGCTCTAGCAGTGGTTCATGTCATCAAAAGGAAGAAATTTGCTGAGTTGCTTGAAGATTGGGAGCAGGACTATGGTCCACATAGATTCAAGTACAAAGATCTTAACTTGGCAACAAAGGGGTTCGGGGAAAAGGAGCTATTGGGAAGTGGAGGATTTGGTAGAGTCTACAAGGGTGTGATGCCAATTTCCAAACTTGAGGTTGCAGTGAAGAGGGTATCCCATGAATCCAGACAAGGGATGAGGGAATTTGTGGCAGAAATTGTTAGCATTGGCCGTCTTCGCCACAGGAATTTGGTTCCCCTTTTGGGCTATTGCAGGCGCAAGGGAGAGTTGCTTTTGGTTTATGACTACATGCCAAATGGAAGCCTAGACAATTATCTTTATAACCAACCAAGAGTGACCCTTAATTGGAGCCAGAGATTCAGAATCATCAAAGGGGTTGCTTCAAGTCTGTTCTATCTACATGAAGAATGTGAGAAAGTTGTGGTCCACAGAGACATTAAGGCTAGCAATGTATTACTAGATGCAGAATTGAATGGTAGATTAGGGGACTTTGGTCTTGCAAGGTTGTATAACCATGGAACTGATCCTCAAACTACCCATGTGGTTGGAACTCTTGGGTATCTTGCACCTGAGCATACCAGAACTGGTAAGGCAACTACAAGCTCTGATGTGTTCGCTTTTGGTGCTTTTTTGCTAGAGGTTACTTGTGGAAGGAGGCCCATAGAGCAAGTAGGAGAATCGGAGAGTGTAATTCTGGTTGATAGGGTGTTTGATTGTTGGAAAGGAGGTGAAATTCTAGAGGCAAAGGATCCAAACTTGGGACCAGGTTATAGGCCAGATGAAGTTGAGTTGGTGTTGAAACTTGGTTTGTTGTGCTCACATTCAGAGCCTTTGGCTAGGCCAACTATTCGCCAAGTTGTGCAATACTTGGAGAGGGATGTGCCCCTGCCAGATATGTCTCTGCTTAGTTTATCTCCCACTGGCTTAACTTTTGGGCACCATGAAAACTTTCAGGATTGTCCTATGTCTTATCCATCTTCTATGGATAGGCCACTCTCCCATACTTCATCTGTTGCTGAATCACTTCTCTCTGGGGGTCGTTGA 2001 0.4238 MSFKFVAMVFLLVTVIACEDTSFTYDGFQSSHLYLDGNSELTTNGLLKLTNATKQQKGHAFYPNPIVFKNTSNGIVSSFSSTFVFAIRSEYPNLGGHGIVFVVSPTKGLPDSLQSQYLGLFNETNNGNSSNNVFGVELDTILNSEFSDINDNHVGIDINGLQSTKSAAAGYYSNGAFKNLSLISGYPMQVWVEYDGIKKQIDVTLAPINMDKPQSPLLSLTKDLSPILNSSMYVGFSSSTGSVLTSHYVLGWSFKVNGQAQQLVTCELPQLPRLGNKEESRVLIVGLPLISLSLVLMVALAVVHVIKRKKFAELLEDWEQDYGPHRFKYKDLNLATKGFGEKELLGSGGFGRVYKGVMPISKLEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDNYLYNQPRVTLNWSQRFRIIKGVASSLFYLHEECEKVVVHRDIKASNVLLDAELNGRLGDFGLARLYNHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVFAFGAFLLEVTCGRRPIEQVGESESVILVDRVFDCWKGGEILEAKDPNLGPGYRPDEVELVLKLGLLCSHSEPLARPTIRQVVQYLERDVPLPDMSLLSLSPTGLTFGHHENFQDCPMSYPSSMDRPLSHTSSVAESLLSGGR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1924 666 Gene3D - 19 268 - -
Apr4g1924 666 ProSiteProfiles Protein kinase domain profile. 339 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1924 666 PANTHER - 4 648 - -
Apr4g1924 666 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Apr4g1924 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 4 648 - -
Apr4g1924 666 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Apr4g1924 666 Pfam Legume lectin domain 21 264 IPR001220 GO:0030246
Apr4g1924 666 CDD lectin_legume_LecRK_Arcelin_ConA 21 258 IPR001220 GO:0030246
Apr4g1924 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 275 IPR013320 -
Apr4g1924 666 CDD STKc_IRAK 345 611 - -
Apr4g1924 666 Pfam Protein kinase domain 341 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1924 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Apr4g1924 666 MobiDBLite consensus disorder prediction 643 666 - -
Apr4g1924 666 Gene3D Transferase(Phosphotransferase) domain 1 416 621 - -
Apr4g1924 666 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Apr4g1924 666 SMART serkin_6 339 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1924 666 SUPERFAMILY Protein kinase-like (PK-like) 314 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1924 Apr-Chr4 27313768 27315768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1924 17 666 Receptor kinase-like Gene Family AT2G37710 63.511 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr4g1924 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1924 - - gmx:100783815 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1924 4 27313768 27315768 Apr4g1924 4 27313768 27315768 ECH