Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1922 ATGTCCTTCAAGCTTGTGTTGGTGGTGTTTTTGTTGGTGACAGTGGTAGCCAGTGAAGATACCAGTTTCATCTATAACGGGTTCCAATCATCCCATTTATATGTCGATGGTATTGCTGAGTTGACTCCAAATGGCTTACTCAGACTGACCAATGACACAAAGCAACAAAAGGGTCATGCTTTCTACCCAAATCCTATAGTTTTCAAGAACACCTCAAATGGAACCGTGTCTTCTTTCTCGACAACTTTTGTGTTTGCCATAAGACCCGAATATGCAGCTTTGAGTGGCCATGGGATTGTTTTTGTAGTTGCTCCAACAAAAGGGCTTCCAAATTCTCTACCAAGTCAGTACCTTGGCCTTTTCAATGACACCAACAATGGCAACAGTAGTAACCATGTGTTTGGTGTTGAACTTGACACCATTCAGAGCAAGGAGTTTGCTGATATCAATGACAACCATGTTGGAATTGATATCAATGACTTGAAGTCAGCCAACTCAACTTCTGCAGGGTATTATAGTAGTGGTCGGTTTCAAAATTTGACCCTTTTCAGTGGCTACCCGATGCAGCTATGGGTGGAATATGATGGCGCGAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAACATGGATAAGCCACAACGCCCTTTGTTAGCATTGACCAAGGATCTTTCTCCAATCCTGGACGATAGCATGTATGTTGGATTCTCATCATCTACTGGGTCAGTCCATACTTCCCATTATATTCTTGGTTGGAGCTTTAAGGTCAATGGCCAGGCTCAACAGCTTACAATCTCTCAACTTCCCAAGCTTCCTAGACTTGGTGGTAAAAAGGAGGCTAAGTTTCTCACTGTTGGGTTGCCTTTGATTTCACTAACTTTGGTTTTTATGTTGAGTCTAGCCGTGGCTTATCTCATCAAAAGGCAGAGGAAGTTTGCTGAGCTGCTAGAAGATTGGGAACAGGAATATGGTCCTCATAGGTTCAAGTACAAAGATTTGTACTTTGCCACAAAGGGTTTCAAGGAGAAGGAGCTACTAGGAACTGGTGGATTTGGTAGAGTCTACAAGGGTGTGATGCCAATTTCCAAACTTGAGGTTGCAGTGAAGAAGGTGTCTCATGAATCCAGACAAGGGATGAGGGAATTCGTGTCAGAGATTGTAAGTATTGGTCGTCTTCGCCACAGGAATTTGGTTCCCCTTTTGGGCTATTGCAGACGCAAAGGAGAGTTGCTTCTGGTCTATGACTACATGCCAAATGGAAGCCTAGACAATTATCTTTATAACCAACCAAAAGTGACCCTTAATTGGAGCCAGAGATTTAGAATCATTAAAGGGGTTGCTTCAGGTCTGTTTTATCTACATGAAGAATGGGAGCAAGTCGTGATCCACAGGGACATTAAGGCTAGCAATGTACTATTAGATGCAGAATTGAATGGTAGATTAGGGGACTTTGGTCTTGCAAGGTTGTATGACCATGGAACTGATCCTCAAACCACCCATGTGGTTGGAACTCTTGGGTATCTTGCACCTGAGCATACTAGAACTGGTAAGGCAACTACAAGCTCTGATGTGTTTGCTTTTGGTGCATTTTTGTTAGAGGTTGCTTGTGGAAGGAGGCCTATAGAACATGTAGGGGAATGTGAGACCATAATTCTTGTTGATAGGGTGTTTGATTGCTGGCAAAGGGGTAAGATTCTTGAGGCAAAGGACCCAAATTTGGGGTCAAATTATAGGCCAGAGGAGGTGGAGTTGGTGTTGAAACTTGGTTTGTTGTGCTCACATTCAGAATCCTTAGTGAGGCCAAGCATGCGCCAAGTTGTGCAGTACTTGGAGATGGATGTACCTTTGCCAGATTTGTCTTTGCTTAGTTTATCTTCCACTGGCTTAACTTTTGGGCACCATGTGGATTTCGGGGACTTCTCAATGTCTTATACATCTTCTACGGATAAGCCATTCTCCCACTCTACCCAAACTTCTACCGTTGCTGAATCACTTCTCTCTGGTGGTCGTTGA 2013 0.4337 MSFKLVLVVFLLVTVVASEDTSFIYNGFQSSHLYVDGIAELTPNGLLRLTNDTKQQKGHAFYPNPIVFKNTSNGTVSSFSTTFVFAIRPEYAALSGHGIVFVVAPTKGLPNSLPSQYLGLFNDTNNGNSSNHVFGVELDTIQSKEFADINDNHVGIDINDLKSANSTSAGYYSSGRFQNLTLFSGYPMQLWVEYDGAKKQIDVTLAPINMDKPQRPLLALTKDLSPILDDSMYVGFSSSTGSVHTSHYILGWSFKVNGQAQQLTISQLPKLPRLGGKKEAKFLTVGLPLISLTLVFMLSLAVAYLIKRQRKFAELLEDWEQEYGPHRFKYKDLYFATKGFKEKELLGTGGFGRVYKGVMPISKLEVAVKKVSHESRQGMREFVSEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDNYLYNQPKVTLNWSQRFRIIKGVASGLFYLHEEWEQVVIHRDIKASNVLLDAELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVFAFGAFLLEVACGRRPIEHVGECETIILVDRVFDCWQRGKILEAKDPNLGSNYRPEEVELVLKLGLLCSHSESLVRPSMRQVVQYLEMDVPLPDLSLLSLSSTGLTFGHHVDFGDFSMSYTSSTDKPFSHSTQTSTVAESLLSGGR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1922 670 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Apr4g1922 670 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Apr4g1922 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Apr4g1922 670 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 3 647 - -
Apr4g1922 670 SUPERFAMILY Protein kinase-like (PK-like) 321 621 IPR011009 -
Apr4g1922 670 Gene3D - 19 270 - -
Apr4g1922 670 Pfam Protein kinase domain 340 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1922 670 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1922 670 PANTHER - 3 647 - -
Apr4g1922 670 ProSiteProfiles Protein kinase domain profile. 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1922 670 Gene3D Transferase(Phosphotransferase) domain 1 417 621 - -
Apr4g1922 670 CDD lectin_legume_LecRK_Arcelin_ConA 21 258 IPR001220 GO:0030246
Apr4g1922 670 Pfam Legume lectin domain 21 269 IPR001220 GO:0030246
Apr4g1922 670 CDD STKc_IRAK 346 611 - -
Apr4g1922 670 MobiDBLite consensus disorder prediction 648 670 - -
Apr4g1922 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 275 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1922 Apr-Chr4 27292123 27294374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1922 17 670 Receptor kinase-like Gene Family AT2G37710 67.325 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr4g1922 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1922 - - gmx:100802293 1048.88