Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1912 ATGAAGCTAGATGAGGATCTGGGTCCTGATCGTGAGGATGATATCCAAACTGACGATGAAGAAAATCAGGCAGAAAGGGTGTTTGAACATTTGGATGATGATACCGAATCAGATAACACACCCCTTTCACCAACTTTGTCCAATGAGGTTTCCATGAGTCCCTCTTGGCCTCTAAGTTATAGGCAATCTATGGACATGTTAACTAGTGTAACACCACCTGGACTTACTTTCCTAAAGAGAATTGGTTCAAAAGGAGGAACTAACTCTTTCACTACAGCATTCAGGAGATTTCAGGAAAACGAAGATGATTCATCTTTGAGTGTACCTCTTTTTAGCGAGACAAGTTCATTGACACAACAGGATGAACCTGCCTCAGCACCCCATGAGCAATCAAGCTGTCCACCACCACAGCAGCAATGTTCATTTTCGCAATCAGTAATTAATGGAACCAATATATTATGTGGCATAGGAATTCTTACCATTCCATATGCAGTAAAAGAAGGAGATATTGGCCAGGCTGCTTTTGGAGTTGCCGGTCGCTTGGGGATTGCGATAATTTTATATGTGGAGCTGTTTGCTTCTTGTGTTGAGTATATAATACTAGTCAGTGATAACCTCTCATCACTGTTTCCTAACACCCACATGAGATTTGGTGGGACTGATTTTGACACTCAACAAATTTTTGCCATCACAGCAGCTGTTCTTGTTCTACCTACAGTTTGGCTGCGAAATCTAAACCTTCTTTCTTTTATTTCAGTTGGAGGAATATTTGCAACAATGCTTGTCTCATTCTGCTTGTTTTGGGTTGGAACAATAGACCAAGTTGTTGGATTCAAGCCAGGTGGAAAAGTTTTAGACTTGACAAACATATCTGTCTCGGTTGGTCTCTATAGTTTTGGCTTTGCTGGTCATGCAGTTTTTCCAAACATCTACTCTTCCATGAAGGAACCATCTAAATTCCCATCAGTTCTATATGTCAGCTTTGCCTTTTGTCTGGTTATGTACTTGAGTGTGGGAACAATGGGCTATTTAACGTTCGGAGACTCGGTTGCATCTCAGTTTACCTTAAACATGCCACAAGAATTATATGCATCCAAAATTGCAACCTGGACAACTGCTGTGACTCCACTAGCAAAATATGCCTTAACGTTATTGCCTATTGCATTGAGCATAGAGGAACTCGTCCCTTCTCCCAGGCTAAGATGCCATGCTATGTCTGTTCTTATCAGAACAGTTTTAGTGATGATAAGTTTATTTGTGGCCCTCTATATTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTCATGTCAATCCTAGTTGCACTTATTTATCCTTGTGCATGTTATCTCAAACTACATAGTCATAGATTATCAAAAGTTGAGATAACAAATTGCATTTTGATAATTATTGTGGGGCTGGTATGCGGTTATGTTGGAACATGTTCAGCTATTTCAAGAATAGCTGGCGAAGGGGACTAA 1485 0.4013 MKLDEDLGPDREDDIQTDDEENQAERVFEHLDDDTESDNTPLSPTLSNEVSMSPSWPLSYRQSMDMLTSVTPPGLTFLKRIGSKGGTNSFTTAFRRFQENEDDSSLSVPLFSETSSLTQQDEPASAPHEQSSCPPPQQQCSFSQSVINGTNILCGIGILTIPYAVKEGDIGQAAFGVAGRLGIAIILYVELFASCVEYIILVSDNLSSLFPNTHMRFGGTDFDTQQIFAITAAVLVLPTVWLRNLNLLSFISVGGIFATMLVSFCLFWVGTIDQVVGFKPGGKVLDLTNISVSVGLYSFGFAGHAVFPNIYSSMKEPSKFPSVLYVSFAFCLVMYLSVGTMGYLTFGDSVASQFTLNMPQELYASKIATWTTAVTPLAKYALTLLPIALSIEELVPSPRLRCHAMSVLIRTVLVMISLFVALYIPYFGSLMALIGSFMSILVALIYPCACYLKLHSHRLSKVEITNCILIIIVGLVCGYVGTCSAISRIAGEGD* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1912 494 MobiDBLite consensus disorder prediction 38 54 - -
Apr4g1912 494 MobiDBLite consensus disorder prediction 113 137 - -
Apr4g1912 494 PANTHER AMINO ACID TRANSPORTER AVT1D 49 168 - -
Apr4g1912 494 PANTHER AMINO ACID TRANSPORTER AVT1D 169 489 - -
Apr4g1912 494 MobiDBLite consensus disorder prediction 21 37 - -
Apr4g1912 494 MobiDBLite consensus disorder prediction 1 54 - -
Apr4g1912 494 Pfam Transmembrane amino acid transporter protein 168 483 IPR013057 -
Apr4g1912 494 PANTHER OS05G0424000 PROTEIN-RELATED 49 168 - -
Apr4g1912 494 PANTHER OS05G0424000 PROTEIN-RELATED 169 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1912 Apr-Chr4 27106713 27111465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1912 1 492 Amino Acid or Auxin Permease AAAP Family AT5G02180 44.964 1.11e-160 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1912 K15015 - qsu:112025453 536.954