Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1906 ATGATGGAGGAAGTAATGGCAACATGGTCAGATGGGTCAGAAGATGACCTTGTGAAAGAGCTTTTGGATGACGGGTCTCCTCTAATTATGCTGCCAGAGGAACCTATTGAAGCCTCCAACATAAGAGCTTCTTCAAGTGACCAAGTCTTTAATAGGTTCATCTCCAACATTTACTCAGGACCTACCATAACAGATATTGAAAATGCTTTGTCAGTGACCAACCAAAGAGACCACTTTCAACAACTCTCATCAAGCAGAGTTTCCATATTGGAAAGGGGTTTGAGTAGGATTGAGAATAAGTATACCCTGAAAATCAAGTGCTTTGGAAATGGGATGGGTGATGATGGATATAAGTGGAGGAAATATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTACAGGTGCACCAACCCAAGGTGCAGTGCCAAGAAACAGGTTGAGAGATCCAATGAGGACCCTGACACTCTTATCATAACCTACGAAGGCCTTCATTTGCACTTTGCTTACCCGTATTTCCTCATGACCCAACCTCAGCAATCTAATTCCCATCAACCAATCAAAAAGTCCAAGCCCACTTCTTCACAAGACCAAGCCCTAGACCATAAAGCACGTTATGTTCACCAAGACCAGCATACACAAGAAGCCCATGAAAATGCTACTCTGGGCGTGATGTTATCCACTTCATTGGACTCTCCACAAGACATGGCCCATGAAAATTTGGGCTCACAAGGATTGCTTGAAGACATGGTGCCATTCATGGTAAGGAACCCAGCAAGTAATGTTGATAGTGCTGTCACAAAATTTTCATATTCTTCGTACCGTTCTCCGCCAACATCACCTCTGTGGACTTCTAATTATTCCACCTCCTGTTTTACTGTTGGCTTAAATTCCAGCACTTAG 912 0.4309 MMEEVMATWSDGSEDDLVKELLDDGSPLIMLPEEPIEASNIRASSSDQVFNRFISNIYSGPTITDIENALSVTNQRDHFQQLSSSRVSILERGLSRIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLMTQPQQSNSHQPIKKSKPTSSQDQALDHKARYVHQDQHTQEAHENATLGVMLSTSLDSPQDMAHENLGSQGLLEDMVPFMVRNPASNVDSAVTKFSYSSYRSPPTSPLWTSNYSTSCFTVGLNSST* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1906 303 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1906 303 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1906 303 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 6 274 - -
Apr4g1906 303 MobiDBLite consensus disorder prediction 182 202 - -
Apr4g1906 303 MobiDBLite consensus disorder prediction 182 197 - -
Apr4g1906 303 Gene3D WRKY domain 109 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g1906 303 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1906 303 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 274 IPR044810 GO:0003700
Apr4g1906 303 SUPERFAMILY WRKY DNA-binding domain 111 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1906 Apr-Chr4 27023107 27026363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1906 2 260 WRKY Transcription Factor Family AT5G43290 41.727 1.75e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g1906 WRKY 5.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1906 - - gmx:100810459 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1906 4 27023107 27026363 Apr4g1906 4 27023107 27026363 ECH