Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1903 ATGAGAATGGATCCACGTGTTTTTGGGTTTAGTGGGTCTTCTAGTGAAATCCGATTGAGGAATCAGTCTTTGCCAATTTTGCAGAATCAGAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGAATTTGGTTACCTTCAGTCCAATCTAATGATACCAGCTAATACACCTTCGTCCTCGGTTTTGACTCATGAGGAACCTTCTCCGGAGGATTGTGAATTTTCTGATTCGGTTTTAAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACTTGTATGCTTCAAGATTCTTTGGATCTTCAAATTGCTGAGAAATCATTCTATGAGGTTATAGGTGAAAAGTACCCATTTTCGGCTATAGGGGATCAAAGTTCTGTTGATCCAAATAATGGGGGTGGGTATGACAGCTTACCTGAAAATTGTGGTGCCTGTCCTTGTAATGATGGTGATCTCAGTAGCATTTTTACTAACAATTCTTTGCGGCGAAATTTGGGGGAAGTTCCTAACCAAAATTTGCAAGGCAATAGCATTTCACAGTCATCTTATAGCTCTTCAAACAGTGTAATAAGTAGTGTGGAAGGGCCTGTGGAATCTCCACACAGTATTCTCCAGGTCCCTGATGTGAACAGTGAGAGTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCGAGTGGAAATGGGCTCTTTGCTAATTTGGATACGGCTAATTTTTCAACTCTAGAGCCTGAAATGAGGACTGATGAATTGTCAATTAAGGTGGAGAAGGATGAGGGGGAGTCTTTGCTTGTTGGATCCAAAGGAAGGAAGCATCATCACAGAGAAGAGGGAGATGTTGAAGAAAATAGAAGCAGTAAGCAAGCTGCGATTTACTCTGAACCTACATTGAGATCGAATATGATTGATATAATCCTGCTTCATAGTGTAGGGGATGGCAAGAGGCATTTTATGGCTCGTCGCGAGGCTTTGCAAAATAAGAATGACAAGATAGTAGTGTCAAATGGCAAATCAAAAGCTTCCGGTGGTGGAAAGGGACGTGGTAAGAAACAAAATGGGAAAAGGGAAGTGGTTGATTTGAGAACACTTTTGGTTCTTTGTGCACAAGCTGTTGCAGCAGATGACTATAAAAGTGCACATGAGTTGTTAAAGCAGATCAGGCACCACTCGGATACGTATGGAGATGGAAATCAGAGGCTGGCTAGTATCTTTGCTGATGGCCTTGAAGCACGCTTGGCTGGCACTGGAAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTAAAGGCTTATTATCTATATCTTGCTGCTTGCCCTTTTAGGAAGATGACTAGTTTTATCTCAAATGTCACAATAAAGAGCTGTGCAGAAAATTCAATGAGGATCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCCACTTTTATTCAAAGACTTTCGTTAAGATCTGAAGGACCCCCTAAACTTCGAATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTATAGAAACTGGACGCCGCTTGGCAGCCTATGCTGAATCTTTCAAGGTGCCATTTGAGTACAATGGCATAGCCAAAAAATGGGAAACAATTCAACTTGAGGAACTCAAGATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTCATCGTGGTAAAAACGTGCTGGATGAATCTGTGGTTGTGGATAGTCCAAGGAATAAATTCCTCAGTTTGATAAGGAAGATCAATCCGGATATATTCATTCATGGCATTACTAACGGCGGCTTTAACGCCCCTTTCTTTGTTACTCGATTCAGGGAAGCACTGTTTCACTACTCTTCACTTTTTGACATGCTTGAAACTATTGTGCCTCGTGAGGACTGGGAAAGGAGGCTAATTGAGAAAGAGATATTTGGAAGGGAAGCATTGAATGTTATAGCTTGTGAAGGCTGCGAGAGAGTAGAGAGGCCAGAGACATATAGACAATGGCAAGTTCGAATTCTGCGGGCAGGATTTTTGCAACAACCTTTTGATCATGAGATAGTAAAGAGGGCAATAGAGAAAGTAAGGTCTAGCTACCACAAAGATTTTGTAATTGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAAGGGCGAATCGTCTATGCCATTTCTTGTTGGAAACCTGCATGA 2229 0.4127 MRMDPRVFGFSGSSSEIRLRNQSLPILQNQRFENGFFDQSREFGYLQSNLMIPANTPSSSVLTHEEPSPEDCEFSDSVLSYISQILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPFSAIGDQSSVDPNNGGGYDSLPENCGACPCNDGDLSSIFTNNSLRRNLGEVPNQNLQGNSISQSSYSSSNSVISSVEGPVESPHSILQVPDVNSESQSILQFQKGVEEASKFLPSGNGLFANLDTANFSTLEPEMRTDELSIKVEKDEGESLLVGSKGRKHHHREEGDVEENRSSKQAAIYSEPTLRSNMIDIILLHSVGDGKRHFMARREALQNKNDKIVVSNGKSKASGGGKGRGKKQNGKREVVDLRTLLVLCAQAVAADDYKSAHELLKQIRHHSDTYGDGNQRLASIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYYLYLAACPFRKMTSFISNVTIKSCAENSMRIHVIDFGILYGFQWPTFIQRLSLRSEGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYAESFKVPFEYNGIAKKWETIQLEELKIDRDEYLVVTCFHRGKNVLDESVVVDSPRNKFLSLIRKINPDIFIHGITNGGFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERRLIEKEIFGREALNVIACEGCERVERPETYRQWQVRILRAGFLQQPFDHEIVKRAIEKVRSSYHKDFVIDEDSQWLLQGWKGRIVYAISCWKPA* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1903 742 MobiDBLite consensus disorder prediction 170 198 - -
Apr4g1903 742 MobiDBLite consensus disorder prediction 274 293 - -
Apr4g1903 742 MobiDBLite consensus disorder prediction 342 362 - -
Apr4g1903 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 741 IPR005202 -
Apr4g1903 742 ProSiteProfiles GRAS family profile. 360 740 IPR005202 -
Apr4g1903 742 PANTHER SCARECROW-LIKE PROTEIN 9 36 741 - -
Apr4g1903 742 MobiDBLite consensus disorder prediction 274 296 - -
Apr4g1903 742 Pfam GRAS domain family 369 740 IPR005202 -
Apr4g1903 742 MobiDBLite consensus disorder prediction 170 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1903 Apr-Chr4 26962975 26966545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1903 70 741 GRAS Transcription Factor Family AT2G37650 52.662 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr4g1903 GRAS 1.1e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1903 - - ccaj:109816616 1227.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1903 4 26962975 26966545 Apr4g1903 4 26962975 26966545 ECH