Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1897 ATGGGTGCTTGTTGGAGTACTCGGATTAAGGCTGTGAGTCCTTCCAACACAGGGTTCACTTCTAGAAGTGTCAGCAGGAGCGGCTATGACACCAGTTCAAATAGCAGGAACTCATCAGCTTCCATATCTGTCACTTCTCGGAGTGAGGGTGAGATCTTGCAATCTTCCAACTTGAAAAGCTTCAGCTATAATGAGCTAAAGGCAGCCACAAGAAATTTTCGCCCGGATAGTGTCTTGGGGGAGGGTGGGTTTGGTTCAGTTTTCAAGGGCTGGATTGATGAGCATTCACTTGCTGCCACCAAACCAGGAATAGGCATGATTGTTGCTGTGAAGAGACTTAACCTAGATGGATTCCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTACAGCATCCGAACCTTGTCAAGTTAATAGGATACTGTTTTGAGGATGAGCATCGGCTTCTGGTTTATGAATTCATGCCTAAGGGTAGCATGGAAAATCATCTGTTCAGACGAGGTTCTTACTTTCAGCCATTCTCTTGGAATTTGAGGATGAAAATAGCCCTTGGGGCTGCAAAGGGCCTTGCTTTTCTCCATAGTACAGAACCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTGCTTGATACTAGCTACAATGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAATTGGTGATAAAAGCCATGTCTCTACTAGGGTCATGGGAACCCGTGGATATGCAGCTCCAGAGTATCTAGCAACAGGTCATCTCACTGCCAAGAGCGATGTATATAGTTTTGGGGTAGTTCTTTTGGAAATGATATCAGGAAGACGGGCGATAGACAAGAACCAGCCAACTGGAGAGCACAACCTTGTTGAATGGGCCAAGCCTTACCTATCTAATAAACGCAGAGTTTTCCGTGTCATGGATCCACGTCTTGAAGGTCAATATTCACATAGTCGAGCTCAAGCAGCAGCTGCGCTGGCTGTGCAATGTCTTGCTATAGAGCCTAAGTGCAGGCCAAATATGGATGAGGTGGTAAGAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAAAAAAGGTGGTGATCATAAACAGCATCATGCACACAATAATGGCCTCGGCCGTTCCAGTGGCCACCCTGCTGCACCCAGCAATGGTAGTGCCGATGTTCCTAGAAAGGCTTCTGCTTATCCCAGGCCTTCTGCTTCTCTCCTTCACCCTTGA 1248 0.4639 MGACWSTRIKAVSPSNTGFTSRSVSRSGYDTSSNSRNSSASISVTSRSEGEILQSSNLKSFSYNELKAATRNFRPDSVLGEGGFGSVFKGWIDEHSLAATKPGIGMIVAVKRLNLDGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWNLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTSYNAKLSDFGLARDGPIGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPTGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHSRAQAAAALAVQCLAIEPKCRPNMDEVVRALEQLQESKDMQKKGGDHKQHHAHNNGLGRSSGHPAAPSNGSADVPRKASAYPRPSASLLHP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1897 415 MobiDBLite consensus disorder prediction 13 42 - -
Apr4g1897 415 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Apr4g1897 415 Gene3D Transferase(Phosphotransferase) domain 1 159 382 - -
Apr4g1897 415 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Apr4g1897 415 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
Apr4g1897 415 PANTHER OS01G0588500 PROTEIN-RELATED 22 394 - -
Apr4g1897 415 PANTHER KINASE 1B 22 394 - -
Apr4g1897 415 MobiDBLite consensus disorder prediction 362 415 - -
Apr4g1897 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Apr4g1897 415 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1897 415 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1897 415 MobiDBLite consensus disorder prediction 362 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1897 Apr-Chr4 26785831 26789258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1897 49 363 Glycoside Hydrolase AT3G07070 50.633 1.93e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr4g1897 Pkinase 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1897 - - gmx:100793817 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1897 4 26785831 26789258 Apr4g1897 4 26785831 26789258 ECH