Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1888 ATGGGTAACCGAATCGGTAACCTCTGCCTCTGTTCCGCCGGCGCCGGCGAAATATCCGGCAGGTTCGAGAACAGAGCTTCCTTCCTCTCCAAGCAACATGACAGAGCCCTTGGAAATTCCATCTGCTACGTGAGACCGGACACGTGTCAGTTTTCCGGCGATTCCATTTCCGACGATGACGTCACTCTCATGACTTTCCGGTCAGTTTCCGGTGCCACCGTGAGTGCAAACCCGTCAGCGACACCGTCAACTTCACTCGATAATTCCCTTCAACACGGCACCGTTTTGGACTCCTCTGCTTCGTTTGAGAGCTCTGGTTCCTTCACTTCGACGATCATGGTGCCTTTTCAACACCAACTTGCTCCTCGTGGATTCTCTGTGGGAAGGTCCACGGAAAGAGAGTTATCTTGGGGTCGTTGTGATCGTGTGGTGAATGGTGCAGGCTCTGTTGAGAAAGGTTCTTCTGAAGCCCCTTTAAAGAAGTTGAAGAGAAGTTTGTCACATGGCGGATATGTGTTTCAGAACAAAACAAGTAAGCGTAGCTTGAAAAGGGTTCTGAATAGAGCGTTTTTCAGTTTTGGAAAAATGTCCATTTTCAAGAAAAATGATAACTTCAATGCGAGAGTTAGTTGTAGTACAAGTTTGAGTGCTGAGTTGAGTTTGCATGGTGTTGAGGGTGATAATAACTATTTGGATGATGATGGTGATGGGTGTGATGTGTTAAAGGGGTGTGAGAATCTTCACTGGGCTCAAGGGAGAGGTGGTGAGGATCGTGTGCATATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGGTTTAATGGCCCTGATGCCACTGATTTTCTTCTTAACAATTTGTTTTATGCTGTGTATGATGTCGAGCTCCAGGGGATGTTGTGCAGTCAAAAGAATAAAGAGGTGAATGGTGAAAAAGTGGTAGAGTTGAGTCACTCAGAAGTGTTACAAGGTCTTTCAGAGGCCTTGAGGAAGAGTGAGGATGCATTCCTAAGGAATGCTGATGAGATGATTGCTCATAGCCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTGGTGTTGATGAAGGGTCAAGATGTTTACTTGATGAATGTGGGAGATAGTCGTGCTGTGTTGGCTACTAACACTGGCAATTCCCTTCAGCTCACCATGGAGCATAGCACTCATGTGAAAGAGGAGGTTTACAGAATCAGGAGGGAGCACCCAGATGACCCTTTTGCAGTAACTAAAGGCCGAGTGAAAGGTTGCTTGAGTGTCACAAGGGCTTTTGGGGCAGGGTTCCTTAAGCAGCCTAAGCAAAACAATGCAGTGTTAGAAACTTTTAAAGTGAGATACATAGGGGAATCCCCATACATCACATGTTCCCCTTCACTCCATCACCACAGGCTGAGCCCACATGACAAATTCCTCATATTGTCATCTGATGGGCTTTACCAATACTTCACCAATGAAGAAGCAGTCGCCAAAGTAGACTCATTCATCTCTATGTTTCCAGATAGAGATCCTGCTCAACTTCTTATTGAAGAAGCACTAAGTCGAGCAGCAAAAAAGGCTGGGATGGAGTTCCATGAGTTGCTTGACATTCCACAAGGGGAACGGCGTCATTACCATGATGACATTTCTGTTGTCATAATCTCCTTGGAGGGAAAAATATGGCGTTCACTTGTGTAA 1704 0.4583 MGNRIGNLCLCSAGAGEISGRFENRASFLSKQHDRALGNSICYVRPDTCQFSGDSISDDDVTLMTFRSVSGATVSANPSATPSTSLDNSLQHGTVLDSSASFESSGSFTSTIMVPFQHQLAPRGFSVGRSTERELSWGRCDRVVNGAGSVEKGSSEAPLKKLKRSLSHGGYVFQNKTSKRSLKRVLNRAFFSFGKMSIFKKNDNFNARVSCSTSLSAELSLHGVEGDNNYLDDDGDGCDVLKGCENLHWAQGRGGEDRVHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYAVYDVELQGMLCSQKNKEVNGEKVVELSHSEVLQGLSEALRKSEDAFLRNADEMIAHSPVLAMMGSCVLVVLMKGQDVYLMNVGDSRAVLATNTGNSLQLTMEHSTHVKEEVYRIRREHPDDPFAVTKGRVKGCLSVTRAFGAGFLKQPKQNNAVLETFKVRYIGESPYITCSPSLHHHRLSPHDKFLILSSDGLYQYFTNEEAVAKVDSFISMFPDRDPAQLLIEEALSRAAKKAGMEFHELLDIPQGERRHYHDDISVVIISLEGKIWRSLV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1888 567 SMART PP2C_4 240 556 IPR001932 -
Apr4g1888 567 Pfam Protein phosphatase 2C 292 527 IPR001932 -
Apr4g1888 567 Gene3D - 220 564 IPR036457 -
Apr4g1888 567 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 297 567 - -
Apr4g1888 567 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 15 301 - -
Apr4g1888 567 ProSiteProfiles PPM-type phosphatase domain profile. 241 558 IPR001932 -
Apr4g1888 567 CDD PP2Cc 255 558 IPR001932 -
Apr4g1888 567 SUPERFAMILY PP2C-like 255 559 IPR036457 -
Apr4g1888 567 PANTHER PROTEIN PHOSPHATASE 2C 297 567 IPR015655 GO:0004722|GO:0006470
Apr4g1888 567 PANTHER PROTEIN PHOSPHATASE 2C 15 301 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1888 Apr-Chr4 26591375 26594109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1888 1 567 PP2C-type Phosphatase Gene Family AT1G07630 44.725 6.08e-173 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1888 - K01102 gmx:100804061 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1888 4 26591375 26594109 Apr4g1888 4 26591375 26594109 ECH