Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1886 ATGCCTTCATCGTCTTCTTCTTCGACTATAGCCATTACCGCTTCTCGTCTTCGGAGTCTGAGAATTTGGTCCACTAAGGACTACGTAATCGCAGCATTCTTTTTCCTTCTCCTCTTCTCGCTCATACTCCTTTCCCATTTAGATTCTTATTCCGATTCCCATTCCGGCTCCAACCTGGTTCCCTTAACCCTGCTCCGCAACAACGCCAACCAAACACGCCCACTTTGCTTGGATGGGAGCGCCCCCGGTTACCACTTTCAAAACGGGTTCGGATCCGGATCTCGCAACTGGTTGATTCACACCGAGGGAGGAGGGTGGTGCAATTCTGTAGCTTCATGTTCTCAGCGAAAATTCACTCCTCTGGGCTCTTCCAAGTATATGGAGACACTGATTCCTTTTTTGGGGATTTTGAGCTCTGACCCCTCTCAGAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGCGCATCTTTTGCTGGTCATCCGGACAGCGAGGTTAGGATTGATTTTACCTTCGGTACTGGAAGTGGCTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATTATTGATGAACTCTTATCAATTGGCATGTCTAAGGCAAAGCAGGCATTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAGCTCTTATTCATTGTGATAACTTCCGACAAGTACTTCCAAAGGAAGCAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAATAATACAATTAGATCTTTCTATAGTGATGTTGTCCAGCTTCAGGGTGTTGCAAAAAGTTTGCACAAAGAGTGCATTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCTGAAATTGTTAAAAACATAAAGACTCCTGTGTTCCTTGTTCATCCAGGTTATGATTATTGGCAGATACGCAATATTTTGGTACCTCATGGATCTGATCCCCATGGTCTCTGGAAAAGATGCAGACTGAACATTCACAGTTGTAATGCTAACATGGTTGATAAACTGGACCGTTTCCGTGGCTCTTTGCTGAAGGCTGTGAATGAATTCCGACAACAAAAGCAGATTGGAATGTTTATAAATTCCTGCTTTATCCATTGCCAGACTGAGAAGGAAGTGACATGGCATTCACCCAACTCTCCTAAAATTAACGATAAGACAATTGCTGAATCTGTTGCCGATTGGTTCTTTGACCGAGAAGTGGTGAAGCGTGTTGACTGCTCGTATCCGTGCAATCCCACTTGCTACAATATGGATTTCACCTGA 1302 0.4447 MPSSSSSSTIAITASRLRSLRIWSTKDYVIAAFFFLLLFSLILLSHLDSYSDSHSGSNLVPLTLLRNNANQTRPLCLDGSAPGYHFQNGFGSGSRNWLIHTEGGGWCNSVASCSQRKFTPLGSSKYMETLIPFLGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPDSEVRIDFTFGTGSGLFFRGQIIWEAIIDELLSIGMSKAKQALLSGCSAGGLAALIHCDNFRQVLPKEATVKCLADAGFFLDEKDISGNNTIRSFYSDVVQLQGVAKSLHKECIAKMEPSKCLFPSEIVKNIKTPVFLVHPGYDYWQIRNILVPHGSDPHGLWKRCRLNIHSCNANMVDKLDRFRGSLLKAVNEFRQQKQIGMFINSCFIHCQTEKEVTWHSPNSPKINDKTIAESVADWFFDREVVKRVDCSYPCNPTCYNMDFT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1886 433 Pfam Pectinacetylesterase 57 413 IPR004963 GO:0016787
Apr4g1886 433 PANTHER NOTUM-RELATED 22 428 IPR004963 GO:0016787
Apr4g1886 433 PANTHER PECTIN ACETYLESTERASE 4 22 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1886 Apr-Chr4 26572429 26578421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1886 15 399 Carbohydrate Esterase AT3G09410 56.962 1.21e-161 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1886 K19882 - gmx:100792819 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1886 4 26572429 26578421 Apr4g1886 4 26572429 26578421 ECH