Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1867 ATGGAGTTTCTCAAGCTTTTCTCTCTCTACATTTCCATGTCCTTCTTCTTCTTCTTCTTCTTCTTTAGTACCTCCACAAAGTCACTGTCTACTTCTGCATCCACTTCCTCTGATGTTGAACTTCTCTTGGGAAAAATAAGAGCTTCACTGCAAGGTAACACTGACAACCTAGTTTTGTCTTCATGGAACTCCTCAACACCACTTTGTCAGTGGAGAGGTCTCAAATGGGTGTTCTCCAATGCCACTCCTCTCTCATGCACCGACTTGTCTTCACCTCAATGGACTAATCTTTCACTCTACAAAGACCCTTCTCTGCACCTTCTTTCTCTGCAGCTTCCTTCTGCTAATCTCTCTGGTTCACTCCCCAGAGAGCTTGGGGAGTTCCCTATGCTTCAAAGTCTTTATCTTAACATCAATTCATTGAAAGGAACCATTCCTCTTGAACTTGGTTATAGCACCTCTCTCTCTGACATTGATCTGGGTGATAATATGTTAAGTGGGGTTCTTCCCCCATCCATTTGGAACTTGTGTGAGAGGCTTGTTTCCCTTAGATTACATGGTAATTCACTATCTGGGTCTGTTTCAGAACCCGCATTGCCTAATTCATCTTGCAAGAATCTGCAGTTGCTTGATTTGGGTAGCAACAAGTTTTCTGGGAGTTTTCCTGAGTTCATTACAAAGTTTGGTGGGCTAAAAGAGCTTGACTTGGGGAACAACATGTTTATGGGTACAATTCCTCAAGGCTTAACTGAGTTAAGGCTTGAAAAATTGAATCTTTCCCACAATAACTTTAGTGGGGTTTTGCCTTTCTTTGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAAGGGAATAGCCCTGGCTTGTGTGGACCACCTTTGGGAAGCTGTACTAGGAGCTCTACTCTGAGTTCTGGTGCTGTTGCTGGTATTGTTATTAGTCTTATGACAGGAGCTGTGGTTTTGGCTTCTTTGTTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGATGTGGAGAGAGTGAAGATGAGTTGAATGATGAGGAGGAAGATGAGGAAAATGGTAGTAATGCTGTTGGTGGAGCTGGTGAAGGGAAGCTTATGTTGTTTCCTGGTGGTGACAATTTGACATTAGATGATGTGTTGAACGCAACTGGTCAAGTTTTGGAGAAGACATGTTATGGTACAGCTTATAAGGCAAAGCTTGCTGATGGAGGCACAATTGCTTTGAGGCTATTGAGAGAAGGCAGCTGCAAAGATAAGGCTTCATGCTTGTCAGTTATAAAGCAATTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGGGAAAAGCTCCTTATTTATGAGTATTTGCCTCTCAGATCCCTTCATGATCTTTTACATGAACCTAAAGCAGGAAAACCAGTGCTGAACTGGGCTAGGCGACACAAGATTGCATTGGGTATAGCGAGAGGACTTGCTTATCTTCACACAGGACTTGATGTTCCAGTTACACATGCAAATGTAAGATCCAAGAATGTGCTTGTGGATGACTTCTTTGTGGCGAGGCTCACTGATTTTGGCCTCGACAAGCTGATGATTCCATCCATAGCCGACGAAATGGTGGCACTTGCCAAGACCGATGGCTACAAGGCTCCAGAGCTGCAAAGAATGAAGAAATGCAACTCCAGGACCGATGTTTATGCATTTGGTATATTGCTTTTGGAAATCTTGATTGGAAAGAAACCCGGGAAGAATGGAAGGAGTGGCGAGTTTGTGGATTTGCCTTCAATGGTGAAGGTGGCAGTTTTGGAGGAGACAACAATGGAAGTATTTGATGTGGAACTGTTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCACTGAAGCTTGCAATGGGGTGCTGTGCACCAGTGGCATCTGTTAGACCAAGCATGGATGAAGTTGTGAGGCAATTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATATAGTCCTACAGAAACAAGAAGTGGAAGTGTTACCCCATTTTGA 2049 0.4358 MEFLKLFSLYISMSFFFFFFFFSTSTKSLSTSASTSSDVELLLGKIRASLQGNTDNLVLSSWNSSTPLCQWRGLKWVFSNATPLSCTDLSSPQWTNLSLYKDPSLHLLSLQLPSANLSGSLPRELGEFPMLQSLYLNINSLKGTIPLELGYSTSLSDIDLGDNMLSGVLPPSIWNLCERLVSLRLHGNSLSGSVSEPALPNSSCKNLQLLDLGSNKFSGSFPEFITKFGGLKELDLGNNMFMGTIPQGLTELRLEKLNLSHNNFSGVLPFFGESKFGVDAFEGNSPGLCGPPLGSCTRSSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGCGESEDELNDEEEDEENGSNAVGGAGEGKLMLFPGGDNLTLDDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCKDKASCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYEYLPLRSLHDLLHEPKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPVTHANVRSKNVLVDDFFVARLTDFGLDKLMIPSIADEMVALAKTDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEFVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1867 682 ProSiteProfiles Protein kinase domain profile. 382 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1867 682 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 14 682 - -
Apr4g1867 682 Pfam Protein tyrosine and serine/threonine kinase 386 657 IPR001245 GO:0004672|GO:0006468
Apr4g1867 682 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Apr4g1867 682 Gene3D Phosphorylase Kinase; domain 1 372 458 - -
Apr4g1867 682 Gene3D Transferase(Phosphotransferase) domain 1 460 674 - -
Apr4g1867 682 Pfam Leucine rich repeat N-terminal domain 45 73 IPR013210 -
Apr4g1867 682 Gene3D Ribonuclease Inhibitor 178 252 IPR032675 -
Apr4g1867 682 Gene3D Ribonuclease Inhibitor 40 177 IPR032675 -
Apr4g1867 682 SUPERFAMILY Protein kinase-like (PK-like) 386 658 IPR011009 -
Apr4g1867 682 Gene3D Ribonuclease Inhibitor 253 300 IPR032675 -
Apr4g1867 682 SUPERFAMILY L domain-like 72 270 - -
Apr4g1867 682 MobiDBLite consensus disorder prediction 661 682 - -
Apr4g1867 682 MobiDBLite consensus disorder prediction 335 361 - -
Apr4g1867 682 MobiDBLite consensus disorder prediction 663 682 - -
Apr4g1867 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 14 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1867 Apr-Chr4 26123981 26126597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1867 18 682 Receptor kinase-like Gene Family AT3G24660 73.874 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr4g1867 PK_Tyr_Ser-Thr 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1867 - - gmx:100814814 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1867 4 26123981 26126597 Apr4g1867 4 26123981 26126597 ECH