Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1862 ATGGCACTGAATAAGACAGGAAACTTGTCAGGTTCTAAGACCGGTAAGGACCCTTGCTTGTTTCCTCAACACAGCCAAACAGAATTATCCAGTGGTGTTTCAAATACAGGACATAATGTACATAACAATGTCACCAAACAGGCAGGGGAAAAATTTTCTGTGAATTTTGGTCATGATGGAATTGCTGTTGGAAGAGTTCCTGTGTCACCTCTGATATCTCAAAATTGTGAGAATTTGTTTGGGTTGAATAGGGAGAATGGCAATGTCAGATACGAAGATCTTACTAAAATTTTGGGGTTGAGGAGAGTGGACTCCGAAAATTCTTCTGACATATTTGACTTTGTTTCTATAAAACAGCCAGCACAGGAGATGGAGAACGGGGCAGCTGTAAATATTTTAAGCAAAATTCAAAATGGAGACGGTGTGTTGAGGAAGGTTGTTCACGAACCCATTGGTGACCAGCCTGGTCTTGGGTTAGCTGTACCAACCCTTCGCAGATATGAAGCTTCTCAGTCCAATGGATTTTCTGGTTCAGGAACGTTAGATGATTCTCTCCCTGGGAAAATGAAGTTTCTATGCAGCTTTGGTGGAAAAATATTACCAAGACCCAGTGATGGGAAACTCAGAAACGTAGGGGGAGATACCCACATTATATCTATCCGAACGGATATTTCATGGGAAGAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCATACAATTAAGTACCAGCTTCCAGGGGAGGATCTTGATGCTCTAATATCTGTTTCATCTGATGAAGATCTTCAAAATTTGAAAGAGGAATACCATGGGCTTAAAAGACTTGAAGGTTCTCAAAAACTTAGAATTTTTTTAGTTCCTTTGGGTGAAACTGAAGAGACATCTTCAACTGATGCGAGTGCTGTTCAGCTGAGTGATCCTGATTACCAATATGTTGCTGCTGTAAATGGTTTAATAGACCCTACTAGAATAAACCAATCAGGTGAGCAAAGTTTGACAAATGGAGCAAGTCAGCCAGCAACAGGTTTGAATTTTGCTCCAGGTTCTCAGAAAACTCCACATGTCTCTTCTCCTTTGGAGATTCGGGATGGTATTAATGCTTTCAATCCAGATGGAATTTTGAACGACTCCCTGAATTTTCAAAGGCCCTTGCCAATTTCTCCTACTCCAATTCAGGTAACAGGTACTGGCACAGGTTATATACAATTGCTTGGTAACAACTCATGCCAGGGAAGTATTGAGAGCAATGCTTCATTTACTACTGCTCAGCTACATCATGAGTACTCCAGCATAAGCATTGCTGATTGCAGATACCATCAACAACTGGCTACTACTACTTTGTCAAACAACAGTCACCAACACGGTGATGTTGGTCAGCCCAAGAAGGTCAATGGAGGCCATTTTGAGGACCATAATTCTGGTAAGGAATTAGTGACTACTGTATATGTTAATCCAAGTGATGGTTTTAGTGAAGTTTTTGGTGGAAGGTCCTTGCAAAAGGAAAGAAGAGTCTTCTCTGGAAATCCTCTTTCATGCTTGGATGATCCAATCCATCAACAGGGTGAATCTTATGGAATTACTGACTCACCTCATGCAATTCCTCATGCTTTTTCTGATCCACAGTTGCATGAGAGTGGAGCAAGGTCTGGTTACTTCTCACAAGACAGAATTGGCCAATCTTTCTCCCTGAACCTTGAGAAGGCTCAATTAGCTTCAATGTTACACCCTAGTGTCTCACAAGTGAGCCTTATGGAGCATCTGCATGGTTCCGTTGTCCATCATCCTCAAATGCAAAGTAATATACCAAAAGTTGAGTCAGCTGAGCTTCACAGAAGGCAAGATTTGGCATCTTCTTCTGCATATTTTGAATCATTCGGAATGCATGATCATATGCATATGGATGGCATTTTAAGTGAAAAAAATTACCGTATTGCTCAAACTGACTTAAGTGAATCTGGCTATCTAGCAAAGGATACTCAAGAAAGTTCTGTGAAATTAGAAAGGATGAAGATAGTTGAAGAAAAAAATCCTATTCCCAAGAAGGATTGCAAGGTTTATGGGGGAAAATCAACTGTCACTGATATGGGACATGTGACTGACTTGCATCCTTTGGACCCCTTCACTGCTAATAACTTAAATGCTAAGGCTAATATGCAAAAGAATTGGGAGCTACGTTCAGAGGGTATATTTCCTGCACCATCAGGTATGATGGGCCTCTCTTTAAATAATCTTGTGGAAAAGACCCTGTCTGATCATGACATGTGCCACAGGACCAGTGATGGCAAAAAATGTGCTTTGTCTGAAGGTCTGAATGGAGAACAAGGGACCAATTTTTCATTGACTAGAAATTTTGATTTGAATGCTCCAATTTTGAATTGTGAAGTAGGATCTTGTGACAAAAGTTATCAAGGAGATTATATGTTCAAGCAGTCTGCTGACTCAGATTCTCTTAAAGCTTCACAGATTCAGCCTTCTGAGAATCGGGTAGCTACAGGTTTTCAAGAAATTCCGACTGTAAGTCCGGCAAGTTTTTATCCTGCTGCACTTCATGATGATCTTGGTCCAAGTCTAAACATGCCGATGAATTGCTTGGATAATCCAAGCAATATTATTTCTTTTAAAATGGCACCTTCTCTTCTTGACGACTTGATTACCAGCACTGGTCAAATGGTTGATCAGTTTATCCCCAAACACTCTGCCTCTGGAAAGTCAAAAGTTGATGATAAAATCTCGGGACAACCAAAGAAGTTAGAAAGGTGTAATGATGCAAATCTAACTGAGCCAATTGTAATAGTAGAAGACATGGCTACTAGTGCTGTTCCTCCATATATTGAGTCTTCATCGGTATGCAACCCACATAATTCAGATGAAGAAGAAAGTAGTGTTGTATCCCCATCTCATACTGAAGCTGAGAGCATTATCCCTGAGTCTGAAACTGAGGATTTTAATGATGATGAAACAGAGAAGAATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCATTTATGGTTTGCAGATAATAAGGAATTCTGATCTTGAAGAACTTACAGAGTTGGGATCTGGTACTTATGGAACTGTATATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAAAAGGGCTGCTTTGCAGGGAGATCTTCTGAACAAGAACGGTTGGCTAAAGATTTTTGGAGAGAGGCACAGATCCTCTCAAATCTTCACCATCCCAATGTGCTTGCATTCTATGGAATAGTACCGGATGGGACTGGTGGAACCTTAGCAACTGTAACAGAGTATATGGTTAATGGTTCGCTTAGGCATGTTCTTGTAAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTATTAATTGCCATGGATGCCGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTGCTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGTAATACTCTTGTATCTGGAGGTGTACGAGGAACCCTTCCATGGATGGCTCCGGAGCTGTTGTATGGGAATAGCAACCGTGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATAGTAAAGAACACTCTTAGACCACCTGTGCCCGAACTCTGTGATTCTGACTGGAGGAAGCTTATGGAAGAGTGTTGGTCACCTGACCCGGAAAGTCGGCCCTCATTCACCGAGATAACAAGCAGGTTAAGATCTATGTCTATGGCCCTTCAAGCAAAAGGGAATCATCAGACATGTCAGTTAAGATCCGGTGGTGCTTCCTGA 3918 0.4081 MALNKTGNLSGSKTGKDPCLFPQHSQTELSSGVSNTGHNVHNNVTKQAGEKFSVNFGHDGIAVGRVPVSPLISQNCENLFGLNRENGNVRYEDLTKILGLRRVDSENSSDIFDFVSIKQPAQEMENGAAVNILSKIQNGDGVLRKVVHEPIGDQPGLGLAVPTLRRYEASQSNGFSGSGTLDDSLPGKMKFLCSFGGKILPRPSDGKLRNVGGDTHIISIRTDISWEELMKKTLGICNQPHTIKYQLPGEDLDALISVSSDEDLQNLKEEYHGLKRLEGSQKLRIFLVPLGETEETSSTDASAVQLSDPDYQYVAAVNGLIDPTRINQSGEQSLTNGASQPATGLNFAPGSQKTPHVSSPLEIRDGINAFNPDGILNDSLNFQRPLPISPTPIQVTGTGTGYIQLLGNNSCQGSIESNASFTTAQLHHEYSSISIADCRYHQQLATTTLSNNSHQHGDVGQPKKVNGGHFEDHNSGKELVTTVYVNPSDGFSEVFGGRSLQKERRVFSGNPLSCLDDPIHQQGESYGITDSPHAIPHAFSDPQLHESGARSGYFSQDRIGQSFSLNLEKAQLASMLHPSVSQVSLMEHLHGSVVHHPQMQSNIPKVESAELHRRQDLASSSAYFESFGMHDHMHMDGILSEKNYRIAQTDLSESGYLAKDTQESSVKLERMKIVEEKNPIPKKDCKVYGGKSTVTDMGHVTDLHPLDPFTANNLNAKANMQKNWELRSEGIFPAPSGMMGLSLNNLVEKTLSDHDMCHRTSDGKKCALSEGLNGEQGTNFSLTRNFDLNAPILNCEVGSCDKSYQGDYMFKQSADSDSLKASQIQPSENRVATGFQEIPTVSPASFYPAALHDDLGPSLNMPMNCLDNPSNIISFKMAPSLLDDLITSTGQMVDQFIPKHSASGKSKVDDKISGQPKKLERCNDANLTEPIVIVEDMATSAVPPYIESSSVCNPHNSDEEESSVVSPSHTEAESIIPESETEDFNDDETEKNEFLSDAMIAEMEASIYGLQIIRNSDLEELTELGSGTYGTVYHGKWRGTDVAIKRIKKGCFAGRSSEQERLAKDFWREAQILSNLHHPNVLAFYGIVPDGTGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLLIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLYGNSNRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPELCDSDWRKLMEECWSPDPESRPSFTEITSRLRSMSMALQAKGNHQTCQLRSGGAS* 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1862 1305 MobiDBLite consensus disorder prediction 1 37 - -
Apr4g1862 1305 Gene3D Phosphorylase Kinase; domain 1 1011 1105 - -
Apr4g1862 1305 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 142 1296 - -
Apr4g1862 1305 MobiDBLite consensus disorder prediction 326 358 - -
Apr4g1862 1305 Gene3D Transferase(Phosphotransferase) domain 1 1106 1301 - -
Apr4g1862 1305 SUPERFAMILY CAD & PB1 domains 204 293 - -
Apr4g1862 1305 SMART PB1_new 203 290 IPR000270 GO:0005515
Apr4g1862 1305 SUPERFAMILY Protein kinase-like (PK-like) 1005 1280 IPR011009 -
Apr4g1862 1305 ProSiteProfiles Protein kinase domain profile. 1018 1288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1862 1305 ProSitePatterns Protein kinases ATP-binding region signature. 1024 1049 IPR017441 GO:0005524
Apr4g1862 1305 MobiDBLite consensus disorder prediction 950 987 - -
Apr4g1862 1305 MobiDBLite consensus disorder prediction 950 974 - -
Apr4g1862 1305 PANTHER SERINE-THREONINE PROTEIN KINASE 142 1296 - -
Apr4g1862 1305 CDD PB1_UP2 192 287 - -
Apr4g1862 1305 Pfam Protein tyrosine and serine/threonine kinase 1021 1281 IPR001245 GO:0004672|GO:0006468
Apr4g1862 1305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1143 1155 IPR008271 GO:0004672|GO:0006468
Apr4g1862 1305 PRINTS Tyrosine kinase catalytic domain signature 1100 1113 IPR001245 GO:0004672|GO:0006468
Apr4g1862 1305 PRINTS Tyrosine kinase catalytic domain signature 1137 1155 IPR001245 GO:0004672|GO:0006468
Apr4g1862 1305 PRINTS Tyrosine kinase catalytic domain signature 1208 1230 IPR001245 GO:0004672|GO:0006468
Apr4g1862 1305 PRINTS Tyrosine kinase catalytic domain signature 1252 1274 IPR001245 GO:0004672|GO:0006468
Apr4g1862 1305 SMART serkin_6 1018 1287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1862 1305 Pfam PB1 domain 205 289 IPR000270 GO:0005515
Apr4g1862 1305 Gene3D - 209 289 - -
Apr4g1862 1305 CDD STKc_MAP3K-like 1024 1281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1862 Apr-Chr4 26005096 26016915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1862 185 391 MAP Kinase Kinase Kinase AT1G16270 42.857 1.99e-38 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Apr4g1862 PK_Tyr_Ser-Thr 9.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1862 - - aprc:113862751 2628.97