Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1845 ATGGCTTTCTCAATCCCACTCTTTTTCCTTCTCCTGGTTTCATTTTTCTACTGTTCATCTTCTTTATCTTCATTGTACAAGGGATCCTCCCTCTCTGCAGAGAAACACTTAGAAGACGTTATTGTCTCTGAAAATGGAGTGTTCTCTGCTGGGTTTTTTAAAGTTGGAGAAAACGCATACTCCTTCGCCATATGGTTCAACAACGACCCTCACAACAACAACACCGTTGTTTGGATGGCAAACCGTGACCAACCCGTGACGAAGGTTCTCGAAGTTTCTCTCTTAAACAATGGTAACATTGTCTTGGTTGATGCGGGTCAATACTCGACTTGGTCATCAGACACAGCATCACAAGCCCCATTAAAGTTGCATCTCAGAGATGATGGTAACCTTGTGTTACGTGAGCTTCAAGGAACCGTTTTGTGGCAAAGTTTTGATTTTCCAACTGATACTCTTCTTCCTGGTCAATCTCTTACCAGACACACACAACTTGTGTCTTCTAGAAGCAAGAGTAACCACTCTTCTGGTTTCTATAAACTGTTTTTCGACGATGACAACGTTCTTTGTCTTGTTTACGATGGTCCTGAGGTGTCAAGCACGTATTGGCCAGCCCCTTGGTTGCTACCTTGGCAAAATGGAAGGTTTAATTACAATAGCAGCAGAGTTGCAATGTTAGATTCTCTTGGAAATTTCGTTTCATCAGATAATTATACTTTTTCCACTAATGATCATGGCATGGTGATGAAAAGGAGATTAAAGATGGATTCTGATGGTAATGTTCGTGTCTATAGTAGAAATGATACATCAAAGAAATGGTACGTTTCATGGCAAGTCATAACAGATGCTTGTACTATTCATGGAACTTGTGGAGCTAACAGCACTTGCAGTTATGATCCTAAAAGGAGAAGGAGATGCTCGTGTTTACCAGGGTACAAAGTAAAGAATCAAAGTGATTGGTCTTATGGGTGTGAACCCGTGTTTGATCTTACTTGCAATAGAAGTGAGTCTACATTTTTGGGGATGCATGGTGTCGAGTTTTATGGTTATGACAATAATTATGTCGAAAACAGTACATACACGAATTGTGTGAATTTATGTTTACTAGATTGTAACTGTAAAGGGTTTCAGTACAGATATGATGGGGCCAAAGGGTTTAGCAACTGTTACACAAAGTTACAGTTGCTGAATGGAAGGCGTTCACCTAGTTTTACAGGAATAACTTACTTGCGAGTGCCTAACAGCAATAACATCTCCAAGGAAGAATATGTGAGTGGCAGTGAAATTGATCATGTTTGTTCTGTGCAGCTTCACAGAGACTACGTTAGAAAGCTATCAAGCCGTTTGGTGAGATTTTTTCGGTGGCTGGCTACTGCAGTTGGAACTTTAGAAGTGTTTTGTTTTTCCATGATTTGGGGTTTCCTAATTTGGAACCGTCAAAAGTCTGGTGCGAATCAACAAGGTTACCATCTTACTGTAGCAGGGTTCAGAAAATTCAGTTATTCTGAGTTGAAGAAGGCCACAAAGGGGTTCAGTGAAGAGATTGGAAGGGGTGCAGGTGGGGTTGTATACAAAGGACTTTTGTCAGATCAAAGACATGCAGCAATAAAGAGACTCAATGAAGCTAAACAAGGAGAAGGAGAATTTCTTGCCGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAAAATGGTTCATTGGCAGAAAATCTCTCATCTAGCAGCACACTTGATTGGAGCAAGAGATATGAGATTGCTCTTGGAACGGCTAGAGGTTTAGCTTATCTACACGAAGAATGTCTGGAATGGATTTTGCACTGCGACATAAAGCCTCAAAACATTCTTCTTGACGGTAACTATCAACCCAAGGTAGCAGATTTTGGCTTGTCTAAGTTACTGAACAGAGACAACCTTGATAATTCAAGCTTCTCAATGATAAGAGGAACTCGAGGTTATATGGCACCTGAGTGGCTTTACAATTTACCAATCACCTCCAAAGTGGATGTTTACAGCTATGGAATTGTTCTCTTAGAGATGATAACTGGGAAGAGTCCATCAATGGATGTTGAAACAGTTGATGGAACAGATGCATACAATGGGAGGCTGGTAACATGGGTGAGAGAGAGAAAAAGGAGCACATCTTGGGTGGAGCAAATCATGGATCCTGCAATTGGTCCACATTATGATGCAAGTAAGATGGAAATTTTGGCCAGAGTTGCTTTGGACTGTGTAGAGGAAGACAAAGAAATAAGACCCACCATGAGGCAAGTGGTTGAGATGCTGCAAAGCCACGACACTGATGCTATTCCTCAATGA 2379 0.4111 MAFSIPLFFLLLVSFFYCSSSLSSLYKGSSLSAEKHLEDVIVSENGVFSAGFFKVGENAYSFAIWFNNDPHNNNTVVWMANRDQPVTKVLEVSLLNNGNIVLVDAGQYSTWSSDTASQAPLKLHLRDDGNLVLRELQGTVLWQSFDFPTDTLLPGQSLTRHTQLVSSRSKSNHSSGFYKLFFDDDNVLCLVYDGPEVSSTYWPAPWLLPWQNGRFNYNSSRVAMLDSLGNFVSSDNYTFSTNDHGMVMKRRLKMDSDGNVRVYSRNDTSKKWYVSWQVITDACTIHGTCGANSTCSYDPKRRRRCSCLPGYKVKNQSDWSYGCEPVFDLTCNRSESTFLGMHGVEFYGYDNNYVENSTYTNCVNLCLLDCNCKGFQYRYDGAKGFSNCYTKLQLLNGRRSPSFTGITYLRVPNSNNISKEEYVSGSEIDHVCSVQLHRDYVRKLSSRLVRFFRWLATAVGTLEVFCFSMIWGFLIWNRQKSGANQQGYHLTVAGFRKFSYSELKKATKGFSEEIGRGAGGVVYKGLLSDQRHAAIKRLNEAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSSSTLDWSKRYEIALGTARGLAYLHEECLEWILHCDIKPQNILLDGNYQPKVADFGLSKLLNRDNLDNSSFSMIRGTRGYMAPEWLYNLPITSKVDVYSYGIVLLEMITGKSPSMDVETVDGTDAYNGRLVTWVRERKRSTSWVEQIMDPAIGPHYDASKMEILARVALDCVEEDKEIRPTMRQVVEMLQSHDTDAIPQ* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1845 792 ProSiteProfiles Protein kinase domain profile. 508 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1845 792 SUPERFAMILY Protein kinase-like (PK-like) 485 783 IPR011009 -
Apr4g1845 792 SMART serkin_6 508 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1845 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Apr4g1845 792 SMART blect_4 32 148 IPR001480 -
Apr4g1845 792 ProSiteProfiles Bulb-type lectin domain profile. 22 146 IPR001480 -
Apr4g1845 792 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Apr4g1845 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 203 IPR036426 -
Apr4g1845 792 Pfam S-locus glycoprotein domain 209 314 IPR000858 GO:0048544
Apr4g1845 792 Gene3D - 147 275 IPR036426 -
Apr4g1845 792 Gene3D Transferase(Phosphotransferase) domain 1 583 790 - -
Apr4g1845 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Apr4g1845 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 787 - -
Apr4g1845 792 CDD B_lectin 41 148 IPR001480 -
Apr4g1845 792 Pfam Protein kinase domain 511 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1845 792 CDD STKc_IRAK 514 783 - -
Apr4g1845 792 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Apr4g1845 792 Pfam D-mannose binding lectin 75 163 IPR001480 -
Apr4g1845 792 CDD PAN_AP_plant 327 412 - -
Apr4g1845 792 Gene3D - 17 146 IPR036426 -
Apr4g1845 792 ProSiteProfiles PAN/Apple domain profile. 331 413 IPR003609 -
Apr4g1845 792 ProSiteProfiles EGF-like domain profile. 279 317 IPR000742 -
Apr4g1845 792 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1845 Apr-Chr4 25575457 25577837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1845 479 782 Receptor kinase-like Gene Family AT3G58690 39.809 2.59e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr4g1845 Pkinase 2.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1845 - - gmx:100784287 1229.54