Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1843 ATGGCCTTCTCAATGCCACTCTTCCTTCTAACACTCTTCTTCTCTTTCCAATCTTCATCATCATCACTCACGAAGGGTTCTTCCCTCTCAGTGGAGAACCCCCAAGACTTCATCATCTCCCCAAACGGCGTCTTCTCCGCTGGCTTTATTTCCGTCGGCGAAAATGCTTATTCCTTCGCCATATGGTTCACTGAACCGCATTTCCACACCCCCAACACCGTGGCGTGGATGGCGAACCGTAACCAACCCGTGAATGGAAAGTGCTCGAAGCTTTCCCTCTTACACACAGGTAACTTAGTCTTGCTTGATGCTGCTTTTAACAGCGCTTGGTCTTCAAACACCGCTTCATTAGCCCCACTAGAGTTGCATCTCAAAGATGATGGCAATCTCGTGTTACGTGACTTGCAAGGAACCGTTTTATGGCAAAGTTTTGATTTTCCAACTGATACACTTCTTCCAGGTCAACCCCTTACTAGGTACACACAACTTGTGTCTTCAAGAAGCCAAAGTAACTATTCCTTTGGTTTCTATAAGTTTTTCTTCGACGATAGCAACGTTCTTTCTCTTCAGTACGATGGTCCTGATGTTTCAAGTAGTTATTGGCCCAAACCTTGGTTACTAAGTTGGGATGTTGGAAGGTCTTATTTCAATAGTAGTAGAATTGCGGTGTTGGATTCTCTTGGGCGTTTCAATTCATCGGATAATTTCACTTTTATGACATCTGATTATGGCACGGTGTTACAAAGAAGGTTGAAATTGGATTGTGATGGTAATGTTAGGGTGTATAGTAGAAATAATGTGTTAGAAAAATGGTATGTTTCGTGGCAAGCGATTTCTAGTGGTTGTGTAGTTCATGGGATTTGTGGGGCTAATAGTACTTGTGATTATGATCCTAAGAATGGGAGAAAATGTTCGTGTCTTCCGGGGTATAGATTGAAGAATCGCAGTGATTGGTCTTATGGGTGTGAACCCATGTTTGATCTTAGTTGCAATAGAGATGAGACTACTTTCTTAGAGATGAGGGGTGTTGAGCTTTATGGTTATGATAATCATTATGTTGAAGTTAGTAACTATAGTACTTGTGAAAAATTATGCTTACAAGATTGTACTTGTAAGGGGTTTCAGCATTCATATGGAGAGAAAAAAGGGTTTTATAGGTGCTATACCAAAACACAATTACTCAATGGACGGCGCACACCGATGTTCAGTGGAACAACGTATTTGAAATTGCCTAAGGGTAACAACTTCTCTCATAAAGAATCTGCCACTGACGCTGTGTATGACCATGTTTGTTCAGTTCAACTACAAAGAGTTTATACCAAAGTGCATGCAAGTCATTTTGTGAAGGCTTTTCTGTGGTTTGCAACCACACTTGGAAGTCTTGAAATGGTTTGTATTTTTGTTGTTTGGTGTTTTCTAATTAGGACCAGCCAAAAGTCTAGTGTAGATCAACAAGGGTATCATCTTACAGCAACAGGATTCAGAAAATTTAGCTACTCTGAGCTGAAAAAGGCAACAAAAGGGTTCAGTGAAGAGATTGGAAGAGGTGGAGGTGGGGTTGTGTACAAAGGTCTATTGTCAGATCAAAGACATGCAGCAGTGAAGATGCTTTATAATGCTAAACAAGGAGAAGGGGAGTTTCTTGCTGAAGTGGGCATCATTGGAAGGCTTAACCATATGAACTTAATTGAAATGTGGGGATACTGTGCTGAGGGTAAGCACAGGTTATTGGTATATGAGTATATGGAAAATGGTTCTTTGGCTGAAAACCTCTCATCTAATACTCTTGATTGGAGCAAGAGATATGAAATCGCTCTTGGTATGGCAAGAGTTCTCTCATATCTACATGAGCAATGCTTGGAATGGATTTTACATTGTGATATAAAGCCACAAAACGTACTCCTAGATTCAAACTATCAACCCAAGTTAGCAGATTTTGGATTGTCTAAGCTTCTCAACAGAAATAACCTCAACAATCCAAGCATCTCTATGATCAGAGGAACAAGAGGTTATATGGCACCTGAGTGGGTTCTTAACTTGCCTATCACATCCAAGGTAGATGTTTATAGCTATGGAATTGTTGTTTTGCAAATGATAACGGGAAAAAGCCCAACAAGTATCCAAACTGTTGATGGAGAAGAAACTTATAACGGGAGGCTAGTTGCATGGGTGAGAGAGAAAAGGAGCAATGTGTCTTGGGTGGAGGAAATTATTGAACCTGCAATTGGGTCAAATTATGATAAAAATAAGATGGAAATTTTGACTAGAGTGGCTTTGGAGTGTGTAGTAGAAGACAAAGATTTAAGGCCCCCCATGAGCCAAGTGGTTGAGATGCTTCAATGTCATGCAAGTGATCCTAATTAA 2364 0.4057 MAFSMPLFLLTLFFSFQSSSSSLTKGSSLSVENPQDFIISPNGVFSAGFISVGENAYSFAIWFTEPHFHTPNTVAWMANRNQPVNGKCSKLSLLHTGNLVLLDAAFNSAWSSNTASLAPLELHLKDDGNLVLRDLQGTVLWQSFDFPTDTLLPGQPLTRYTQLVSSRSQSNYSFGFYKFFFDDSNVLSLQYDGPDVSSSYWPKPWLLSWDVGRSYFNSSRIAVLDSLGRFNSSDNFTFMTSDYGTVLQRRLKLDCDGNVRVYSRNNVLEKWYVSWQAISSGCVVHGICGANSTCDYDPKNGRKCSCLPGYRLKNRSDWSYGCEPMFDLSCNRDETTFLEMRGVELYGYDNHYVEVSNYSTCEKLCLQDCTCKGFQHSYGEKKGFYRCYTKTQLLNGRRTPMFSGTTYLKLPKGNNFSHKESATDAVYDHVCSVQLQRVYTKVHASHFVKAFLWFATTLGSLEMVCIFVVWCFLIRTSQKSSVDQQGYHLTATGFRKFSYSELKKATKGFSEEIGRGGGGVVYKGLLSDQRHAAVKMLYNAKQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYEIALGMARVLSYLHEQCLEWILHCDIKPQNVLLDSNYQPKLADFGLSKLLNRNNLNNPSISMIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLQMITGKSPTSIQTVDGEETYNGRLVAWVREKRSNVSWVEEIIEPAIGSNYDKNKMEILTRVALECVVEDKDLRPPMSQVVEMLQCHASDPN* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1843 787 Pfam PAN-like domain 330 392 IPR003609 -
Apr4g1843 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 202 IPR036426 -
Apr4g1843 787 Pfam Protein kinase domain 510 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1843 787 ProSiteProfiles Protein kinase domain profile. 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1843 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Apr4g1843 787 SUPERFAMILY Protein kinase-like (PK-like) 483 780 IPR011009 -
Apr4g1843 787 Pfam S-locus glycoprotein domain 232 313 IPR000858 GO:0048544
Apr4g1843 787 Gene3D Phosphorylase Kinase; domain 1 472 581 - -
Apr4g1843 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Apr4g1843 787 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Apr4g1843 787 CDD B_lectin 37 147 IPR001480 -
Apr4g1843 787 CDD STKc_IRAK 513 780 - -
Apr4g1843 787 Gene3D Transferase(Phosphotransferase) domain 1 582 786 - -
Apr4g1843 787 SMART ntp_6 332 410 IPR003609 -
Apr4g1843 787 ProSiteProfiles PAN/Apple domain profile. 330 406 IPR003609 -
Apr4g1843 787 Gene3D - 15 146 IPR036426 -
Apr4g1843 787 ProSiteProfiles Bulb-type lectin domain profile. 14 145 IPR001480 -
Apr4g1843 787 Pfam D-mannose binding lectin 73 159 IPR001480 -
Apr4g1843 787 SMART serkin_6 507 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1843 787 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 785 - -
Apr4g1843 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 785 - -
Apr4g1843 787 CDD PAN_AP_plant 326 411 - -
Apr4g1843 787 SMART blect_4 28 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1843 Apr-Chr4 25507520 25509883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1843 449 779 Receptor kinase-like Gene Family AT3G58690 35.574 8.13e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr4g1843 Pkinase 6.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1843 - - gmx:100783758 1261.9