Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1830 ATGTCACTTTCAAAATTCGTAGAGAGTAAACCAAACAGCAACAGTCTTCAGCAGTTGATGATGGAGGAAGGAGAAGCTGTGGGAGAAGCCTCTTCTTCAGGGAATAGGCTCAGCAACCATCCAAACTCTTTCCCTCCTTTATCTCCACGCCAGAGAACCAAACCCTCTGAAGATAGCGATGAAGATGTGTTGAGAGTTCCAGATTGTGGAGCGACAAATCCAAGTAGCAGTAATAACGTTAATCAAAGTAATGTGAGGAATAGAGAGGTTCAAGCTGGAAAGCGCCACCGCGGAAGAAACTCTGTAGACAAGGAGCATCGACGCCTCAAGAGGTTGTTAAGGAACAGGGTTTCTGCTCAACAAGCCCGTGAAAGAAAAAAGGTGTACGTGAATGACTTGGAATCAAGAGCGAAAGAGTTGGAAGACAAAAATTCCAACTTAGAAGAGCGTATTTCGACTTTGATAAACGAAAACACGATGCTCCGCAAAGTTCTTATGAACATGAGGCCTAAAGTTGACGAGAGCATTGAAGCGTAG 537 0.4432 MSLSKFVESKPNSNSLQQLMMEEGEAVGEASSSGNRLSNHPNSFPPLSPRQRTKPSEDSDEDVLRVPDCGATNPSSSNNVNQSNVRNREVQAGKRHRGRNSVDKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSNLEERISTLINENTMLRKVLMNMRPKVDESIEA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1830 178 Gene3D Single helix bin 126 167 - -
Apr4g1830 178 SUPERFAMILY Leucine zipper domain 107 166 IPR046347 GO:0003700|GO:0006355
Apr4g1830 178 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Apr4g1830 178 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g1830 178 Pfam bZIP transcription factor 104 163 IPR004827 GO:0003700|GO:0006355
Apr4g1830 178 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 29 177 IPR044280 GO:0000981|GO:0045944
Apr4g1830 178 CDD bZIP_HY5-like 117 158 - -
Apr4g1830 178 MobiDBLite consensus disorder prediction 70 88 - -
Apr4g1830 178 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 29 177 - -
Apr4g1830 178 MobiDBLite consensus disorder prediction 31 52 - -
Apr4g1830 178 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Apr4g1830 178 MobiDBLite consensus disorder prediction 1 105 - -
Apr4g1830 178 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Apr4g1830 178 Coils Coil 123 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1830 Apr-Chr4 25247675 25251903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1830 90 174 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 75.294 1.02e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g1830 bZIP_1 4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1830 K16241 - aprc:113863491 297.745