Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1825 ATGCACAAAATTTGTCATGAAAAAAAATACATCTCAATAATGGGTTTCAGAAGGTGCCCAAACTCCTCTGTTTGCATCATACTAAGTTGTTGTTTATTACATGTTGTTGCCATTTCTTCATCTCAGTCCATCAAGGACCCAGGAACTCTAAACTCAACTAATGGAAACTTCACCTTGGGGTTCTTCAGCATTGAAAATACTACAAATCGTTACCTGGGAATTTGGTGCAAGACCAAAGACACTGTCATATGGGTGGCTAACAGAAACCAACCACTTAAGGATTCTTCTGGGGTTCTTACAATATCTGAAGATGGAAATCTAGTGGTAATGGATGAACAGAAACATGTCATGTGGTCATCAAATGTGTCCAATATCACATCATCCAATTCTATTTTCCAACTTTCAGATTATGGGAGCCTTGTCTTGTTTGAAAATACAACAGGAAATACAAAATGGGAGAGTTTCCAGCATCCTACAAATACATGGTTGCCTCATTTGGAACTTTCTAGCAACAAAATAACAGGTGAAAAAGTAGGACTTACATCATGGAAAAGCCCTTCTGATCCATCCATTGGGAGCTTCTCTTTAAGTATTGAACGCTTTAATATTCCTGAAATCTTCATTTGGAATGATAATCGATCATATTGGCGCAGTGGTCCGTGGAATGGACAAGTGTTTCTTGGGGTACCGGGAATGGAAGCGACGTATCTTAACGGTTTTCGGGTCGAAAATAATGGGGATGGAACAGTTGCTGTATATTTTACCGTAGATGAGTTAGGACTTGTAGTGCTAACCCTGAATTCGCAAGGCCAATTTCAGCAACATACTTGGGATGATGAGAAGGAGGAATGGCAGGTTACATGGACAAGTCCAAGATCGGATTGTGATGTTTATGGTATATGTGGAGCATTTGCAAGCTGTAATTCACAAACCTCACCGATATGTACCTGTTTGAAGGGGTTTGAACCAAGGAACATAGAGGAATGGAATAGACGGAACTGGACTAATGGATGTGTTAGCAGGACACCTTTGCAGTGTGAAAGGGCCAACAACCAAAGCAGAAGTGTGGATAGTAATAAACCAGATGGGTTTTTGAGATTAGAGATGGTCAAAGTGCCTGATTTTGCAGAAGGGTCATCGGTTACACAAGACCAATGCCAAAGCCAGTGCTTGGAGAACTGTACTTGCATTGCATATTCATATGATGCTGTTATTGGCTGTATGACTTGGAGTGGAAGTCTAATTGACATCCAACAGTTCACGCTTGGAGGATCTGATCTATACATTCGTGTAGCCTATACAGAACTAGGTAAAGGGCGAAATATAATTGTCATCATCACAATTCCAGTGATAATCGGAGTTTTGCTATTTCTCACATGTGCATATGTCATCTGGAGAAGGGCTTTGCACCAAGGTAATACAATGAAAAAGAAGCTTGGATTTTTTCGATTCAACAAAGGTACAACATCTGAAGAAAACATAAGTGACAACATAATTGGAGAATTTTCACAAGCTAAGCTACAGGAGCTGTTATTGTTTAACTTTGAAAAGGTTGCAACTGCCACAAACAACTTTCAATCCTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTATACAAGGGAAAACTGCAAGATGGCAAGAAAATAGCAATTAAAAGGCTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTAGTAATTTCTAAGCTTCAACACCGGAATCTTGTAAGGCTTTTGGGCTGCTGTATTGAAGGAGATGAAAAGATGTTGATATACGAATACATGCCAAATAGAAGTTTGGATGCATATCTGTTTGATCCATCAAACAATAAACACCTAGATTGGAGAAAACGCTTTATCATTATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCTAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGCAATATCTTGCTAGATGAGGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCTAGAATTTTTGGAGGGAGTGAAGATCAAGCCAATACCCAAAAGATTGTTGGAACATATGGCTATATGTCGCCAGAATATGCAATGCATGGAGTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTACTAGAGATTGTTAGTGGAAGACAAAACTCAAGCTTTTATGACCCTGAAAATTCTCAGACCATCTTAGGATTTGCCTGGATACAGTGGACGGAAGACAATCTTGTAACTTTGATAGATTCAGGAATATATGATCCTAGCCTTCACAAGGATATTTTGAGGTGCATACACATAGGACTTCTTTGTGTACAAGAATTTGCTGCAGACAGGCCAACTATGGCTACAGTAATTTCAATGCTTAACAGTGAGATTGTGAATCTTCCTCCTCCAAGGGAACCTGCATTTATCCTGAGGCAGAATATGTTGAATTCAGTCTCCTCTGATGAAAGACTTGGATTGTATTCTATCAACACTGCCAGTATTACAGACATCCATGGCAGATAG 2532 0.393 MHKICHEKKYISIMGFRRCPNSSVCIILSCCLLHVVAISSSQSIKDPGTLNSTNGNFTLGFFSIENTTNRYLGIWCKTKDTVIWVANRNQPLKDSSGVLTISEDGNLVVMDEQKHVMWSSNVSNITSSNSIFQLSDYGSLVLFENTTGNTKWESFQHPTNTWLPHLELSSNKITGEKVGLTSWKSPSDPSIGSFSLSIERFNIPEIFIWNDNRSYWRSGPWNGQVFLGVPGMEATYLNGFRVENNGDGTVAVYFTVDELGLVVLTLNSQGQFQQHTWDDEKEEWQVTWTSPRSDCDVYGICGAFASCNSQTSPICTCLKGFEPRNIEEWNRRNWTNGCVSRTPLQCERANNQSRSVDSNKPDGFLRLEMVKVPDFAEGSSVTQDQCQSQCLENCTCIAYSYDAVIGCMTWSGSLIDIQQFTLGGSDLYIRVAYTELGKGRNIIVIITIPVIIGVLLFLTCAYVIWRRALHQGNTMKKKLGFFRFNKGTTSEENISDNIIGEFSQAKLQELLLFNFEKVATATNNFQSSNKLGQGGFGPVYKGKLQDGKKIAIKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLIYEYMPNRSLDAYLFDPSNNKHLDWRKRFIIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGSEDQANTQKIVGTYGYMSPEYAMHGVFSEKSDVFSFGVLLLEIVSGRQNSSFYDPENSQTILGFAWIQWTEDNLVTLIDSGIYDPSLHKDILRCIHIGLLCVQEFAADRPTMATVISMLNSEIVNLPPPREPAFILRQNMLNSVSSDERLGLYSINTASITDIHGR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1825 843 PIRSF SRK 13 843 IPR024171 GO:0004674
Apr4g1825 843 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Apr4g1825 843 SMART ntp_6 359 431 IPR003609 -
Apr4g1825 843 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Apr4g1825 843 CDD STKc_IRAK 531 797 - -
Apr4g1825 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 189 IPR036426 -
Apr4g1825 843 Pfam D-mannose binding lectin 81 184 IPR001480 -
Apr4g1825 843 ProSiteProfiles PAN/Apple domain profile. 346 432 IPR003609 -
Apr4g1825 843 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Apr4g1825 843 SUPERFAMILY Protein kinase-like (PK-like) 513 823 IPR011009 -
Apr4g1825 843 Pfam Protein tyrosine and serine/threonine kinase 527 795 IPR001245 GO:0004672|GO:0006468
Apr4g1825 843 SMART blect_4 41 158 IPR001480 -
Apr4g1825 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Apr4g1825 843 Gene3D Transferase(Phosphotransferase) domain 1 601 802 - -
Apr4g1825 843 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 31 840 - -
Apr4g1825 843 CDD B_lectin 41 158 IPR001480 -
Apr4g1825 843 ProSiteProfiles Bulb-type lectin domain profile. 35 155 IPR001480 -
Apr4g1825 843 SMART serkin_6 525 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1825 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 840 - -
Apr4g1825 843 CDD PAN_AP_plant 342 432 - -
Apr4g1825 843 Pfam PAN-like domain 359 417 IPR003609 -
Apr4g1825 843 ProSiteProfiles Protein kinase domain profile. 525 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1825 843 Gene3D - 35 156 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1825 Apr-Chr4 25181120 25184457 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1825 434 814 Receptor kinase-like Gene Family AT4G05200 51.562 2.74e-131 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr4g1825 PK_Tyr_Ser-Thr 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1825 - - gmx:113002415 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1825 4 25181120 25184457 Apr4g1825 4 25181120 25184457 ECH