Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1823 ATGAAGAAAGAGGTGCCCTTAGGATCAAGTTGTGTAGATCTTATACAACCTATATTCATCCCAGTAATGGGTTTCAACAGCTACTCAAATTTGTTCTTTATTTTGTTGATGCTGTGTTGTTATTTGTTAGAAGTTGGGGTTGCCTTAGACACCATCACATCATCTCATTTCATGAAGGACCCAGAAACTCTAATTTCCAAAGATGGTAACTTCACATTGGGATTCTTCAGCCCAGAAAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGTCTCAATCCACAGTCATATGGGTTGCTAACAGAAACCAGCCATTGAATGGTTCTTCTGGGGTTGTTGCAATATCTGAAGATGGCAATCTTGTGGTATTGAATGGACAAAACCGAGTTATTTGGTCATCAAATGTGTCAACTACAACATCCAACACTAGTTCCCAGTTTTCAGACAACGGAAAACTTGTTCTCATGGAAAGCACTAAAGGAATCATATTATGGGATAGTTTTCAGCAACCTTCAGATACAATACTCCCTGGTATGAAATTATCATGTAACAAAAGAACGGGTGAGAAAGTAAAAATTACATCATGGAAAAGCCCTTCTAATCCATCCATCGGGAGCTTCTATTATAGTATTGAACGCCTAAATCTTCCCGAAATATTCATTTGGAATGAAAGTAGACCATACTGGCGCAGTGGTCCATGGAATGGTGGAGTCTTTATAGGGGTACAGTGGATGGTGACAAGTGCATATATTACTAGTTTTCGTGGTGGAGATGATGGGAAAGAAAATATTGAATTCTATTACACAATTCCAAATGAATTACTTTTTTATATCTATAGCCTGAATTCACAAGGCCAAACTCAATTAAAATATTGGAATGATGAGACCAAAGAAATGCAAGTTAGGTGGACTAGTCTCCAATCTGAATGTGATGTTTATGGTGTATGTGGTGCATTTGCAAATTGTGATTCAAAGAGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAACCAAGGAACAAATGGGAATGGAATAGACAAAACTGGACTAGTGGATGTGTTAGGAGGACTCCTTTGCAGTGTGAAAGGGTCAAAGATCAAAACACTAGTGTAGATAGAAAGGAAGATGGTTTTTGGAAACTGCAAATGGTTAAAGTTCCAGATTTTGCAGAAGGATCAACTGTTACACAAGATATATGCAGAAGCCAGTGCTTGGAGAATTGCTCTTGCGTTGCGTATTCTCACGATGCAGCCATTGGCTGTATGTCTTGGACTGGGAATCTACTTGACATTCAGCATTTCTATGATGGAGGTGTTGATCTATATGTTCGTCTAGCTCATACAGAATTTGATATGTTAGGAAGGGGAAAGAAGAACAAAGCTTTCATGCTGTGTAACAAAGTTGAAATATCAGATGGCCTTACAAGCAACAACGTTATTGGAGAAATATCACAAGTTAAACTCCAGGAGCTATTACTATTCAATTTGGAAAAGCTTGTAGTGGCCACAAATAACTTCCACTCATCCAACAAACTAGGGCAGGGTGGTTTTGGTCCGGTCTACAAGGGGAAACTGCAAGATGGTCAGGAAATAGCTGTTAAAAGACTTTCTAGAGAATCTGGACAAGGGCTACAAGAATTCATGAATGAAGTAGGCGTGATTTCCAAGCTTCAACACCGAAATCTTGTAAGACTTCTTGGCTGCTGTATTGACGGCGACGAAAAGATGTTGATATATGAGTACATGCCAAACAAAAGTTTGGATGCTTTTGTCTTTGACCCATCAAAAAATGAACTCCTAGATTGGAAGAAGCGCTTTAGGATAATAGAAGGAATTGCTCGAGGAATGCTTTATCTTCACAGAGATTCCAGACTAAAAATTGTTCACAGAGATTTGAAGGCAAGCAATATTTTGTTAGATGAAGAGCTGAATCCAAAAATATCGGACTTTGGTATGGCTAGAATCTTTGGAGGGACTGAAGACCAGGCCAATACAAACAGGGTTGTTGGAACTTATGGCTATATGTCCCCTGAGTATGCAATGCAAGGATTGTTTTCAGAAAAATCAGATGTCTTTAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGGAAACGAAACTCAAGCTTTTATGACAATGAACATGCTCACCTTTTAGGATTTGCATGGATACAATGGAGGGAAGGAAATATTTTGTCTTTAATAGATACAGGGATATATGATCCTAGTCATCATAACCATATTTTAAGGTGCATACACATAGGACTTCTATGTGTACAAGAACATGCTGTAGACAGGCCTACTATGGCTGTTGTAATTTCTATGCTTAACAGTGAGATTGCATATCTTCCTCCTCCAAGTCAACCTGCATTCATCCTGAGGCAGAATATGTTGAGTTCAGAGTCATCTAAAGAAAGTCATCAACTCTGCTCCATCAATACTGTTAGTATTACAGACATGAATGGTAGATAG 2472 0.3863 MKKEVPLGSSCVDLIQPIFIPVMGFNSYSNLFFILLMLCCYLLEVGVALDTITSSHFMKDPETLISKDGNFTLGFFSPENSTNRYVGIWWKSQSTVIWVANRNQPLNGSSGVVAISEDGNLVVLNGQNRVIWSSNVSTTTSNTSSQFSDNGKLVLMESTKGIILWDSFQQPSDTILPGMKLSCNKRTGEKVKITSWKSPSNPSIGSFYYSIERLNLPEIFIWNESRPYWRSGPWNGGVFIGVQWMVTSAYITSFRGGDDGKENIEFYYTIPNELLFYIYSLNSQGQTQLKYWNDETKEMQVRWTSLQSECDVYGVCGAFANCDSKSSPICSCLKGFEPRNKWEWNRQNWTSGCVRRTPLQCERVKDQNTSVDRKEDGFWKLQMVKVPDFAEGSTVTQDICRSQCLENCSCVAYSHDAAIGCMSWTGNLLDIQHFYDGGVDLYVRLAHTEFDMLGRGKKNKAFMLCNKVEISDGLTSNNVIGEISQVKLQELLLFNLEKLVVATNNFHSSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRESGQGLQEFMNEVGVISKLQHRNLVRLLGCCIDGDEKMLIYEYMPNKSLDAFVFDPSKNELLDWKKRFRIIEGIARGMLYLHRDSRLKIVHRDLKASNILLDEELNPKISDFGMARIFGGTEDQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGKRNSSFYDNEHAHLLGFAWIQWREGNILSLIDTGIYDPSHHNHILRCIHIGLLCVQEHAVDRPTMAVVISMLNSEIAYLPPPSQPAFILRQNMLSSESSKESHQLCSINTVSITDMNGR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1823 823 ProSiteProfiles PAN/Apple domain profile. 361 446 IPR003609 -
Apr4g1823 823 PIRSF SRK 23 823 IPR024171 GO:0004674
Apr4g1823 823 ProSiteProfiles Bulb-type lectin domain profile. 49 168 IPR001480 -
Apr4g1823 823 Pfam Protein tyrosine and serine/threonine kinase 508 775 IPR001245 GO:0004672|GO:0006468
Apr4g1823 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 475 821 - -
Apr4g1823 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 43 450 - -
Apr4g1823 823 Gene3D - 45 169 IPR036426 -
Apr4g1823 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 475 821 - -
Apr4g1823 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 43 450 - -
Apr4g1823 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 236 IPR036426 -
Apr4g1823 823 Pfam Domain of unknown function (DUF3403) 778 823 IPR021820 GO:0004674
Apr4g1823 823 CDD B_lectin 59 171 IPR001480 -
Apr4g1823 823 Pfam D-mannose binding lectin 95 197 IPR001480 -
Apr4g1823 823 Gene3D Phosphorylase Kinase; domain 1 470 581 - -
Apr4g1823 823 SMART blect_4 55 171 IPR001480 -
Apr4g1823 823 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1823 823 Gene3D Transferase(Phosphotransferase) domain 1 582 782 - -
Apr4g1823 823 Pfam S-locus glycoprotein domain 229 339 IPR000858 GO:0048544
Apr4g1823 823 SMART ntp_6 373 445 IPR003609 -
Apr4g1823 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Apr4g1823 823 SMART serkin_6 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1823 823 CDD PAN_AP_plant 357 446 - -
Apr4g1823 823 Pfam PAN-like domain 373 431 IPR003609 -
Apr4g1823 823 SUPERFAMILY Protein kinase-like (PK-like) 491 812 IPR011009 -
Apr4g1823 823 CDD STKc_IRAK 512 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1823 Apr-Chr4 25166106 25169680 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1823 452 794 Receptor kinase-like Gene Family AT4G05200 54.360 4.72e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr4g1823 PK_Tyr_Ser-Thr 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1823 - - gmx:100779455 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1823 4 25166106 25169680 Apr4g1823 4 25166106 25169680 ECH