Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1819 ATGGAAAAAAAACACATCTCAATAATGGGTTTCAGGAGGTGCACAAACACCTCTGTTTTCATCATATTAAGTTGTTGTTTATTACATGTTGTTGCCATTTCTTCATCTCAGTTCATCAAGGACCCAAGAACGCTAAACTCAAATAATGGAAACTTCACCTTGGGGTTCTTCAGCATTGAAAATACTACAAATCGTTACTGGGGAATATGGTGCAAGACCAAAGACACTGTCATATGGGTGGCTAACAGAAACCAACCACTTAAGGATTCTTCTGGGGTTGTTACAATATCTGAGGATGGGAATCTAGTGGTAATGGATGGACAGAAACATGTCATGTGGTCATCAAATGTGTCCAATATCACATCATCCAATTCTACTTTCCAACTTTCAGATTATGGGAGCCTTGTCTTGTTGGAAAACATAACAGGAAATACAATATGGGAGAGTTTCCAGCATCCTACAAATACATGGTTGCCTCATTTGGAACTATCTAGCAACAAAATAACAGGTGAAAAAGTAGGACTTACATCATGGAAAAGCCCTTCTGATCCATCCATTGGGAGCTTCTCTTTAAGTATTGAACGCTTTAATATTCCTGAAATCTTCATTTGGAATGATAATCAACCATATTGGCGCAGTGGTCCGTGGAATGGACGAGTGTTTCTTGGGGTACCGGGAATGGAAGCGATGTATCTTAACGGTTTTCATGTCGAAAATAATGGGGATGGAACAGTTGCGGGATATTTTACCGTAGATGAGTTAGGACTTACAGTGCTAACCCTGAATTGGCAAGGCCTACTTCAGGAAGATAATTGGGATGATAAGAAGGAGGAATGGCAGGTTACATGGACAAGTCGAAAATCGGATTGTGATGTTTATGGTATATGTGGAGCATTTGCAAGCTGTAATTCACAAACCTCACCGATATGTACCTGTTTGAAGGGGTTTGAACCAAGGAACATAGAGGAATGGAATAGACAGAACTGGACTAATGGATGTATTAGCAGGACACCTTTGCAGTGTGAAAGGGCCAACCACCAAAGCAGAAGTGTGGATAGTAATAAACCAGATGGGTTTTTGAGATTAGAGATGGTCAAAGTGCCTGATTTTGCAGAAGGGTCATCTGTTACACAAGACCAATGCCAAAGCCAGTGCTTGGAGAACTGTACTTGCATTGCATATTCATATGATGCTGTTATTGGCTGTATGACTTGGAGTGGAAGTCTAATTGACATCCAACAGTTCACGCTTGGAGGATCTGATCTATACATTCGTGTAGCCTATACAGAACTAGGTAAAGGCCGAAATATAATTGTCATCATCACAATTATAGTGATAATAGGAGTTTTGCTATTTCTCACTTGTGCATATGTCATTTGGAGAAGGGCTTTGCACCTAGCAATGAAAAAGAAGCTTGGATTTTTTCGACTCAACAAAGGTACAACATCTGAAGAAAACGTAAGTGACAACATTATTGGAGAATTTTCACAAGCCAAGCTACAGGAGCTGTTATTGTTTAACTTTGAAAAGCTTGCGACGGCCACAAACAACTTCCAATCCTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTATACAAGGGGGAACTGCGAGATGGGAAGAAAATAGCAATTAAAAGGCTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTTGTAGTAATTTCTAAGCTTCAACACCGCAATCTTGTAAGGCTTTTGGGCTGCTGTATTGAAGGAGATGAAAAGATGTTGATATACGAATACATGCCAAATAGAAGTTTGGATGCATATCTGTTTGATCCATCAAACAATAAACACCTAGATTGGAGAAAACGCTTTATCATTATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGCAATATCTTGCTAGATGAGGAGCTTATTCCAAAAATATCAGACTTTGGTATGGCTAGAATTTTTGGAGGGAGTGAAGATCAAGCCAATACCCAAAAGATTGTTGGAACATATGGCTATATGTCGCCAGAATATGCAATGCATGGAGTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTACTAGAGATTGTTAGTGGAAGACAAAACTCAAGCTTTTATGACCCTGAAAATTCTCAGACCATCTTAGGATTTGCCTGGATAAAGTGGACGGAAGACAATATTGTCACTTTGATAGATTCAGGAATATATGATTCTAGCCTTCACAAGGATATTTTGAGGTGCATACACATAGGACTTCTTTGTGTACAAGAATTTGCTCCAGACAGGCCCACTATGGCTACAGTAATTTCAATGCTTAACAGTGAGATTGTGAATCTTCCTCCTCCAAGGGAACCTGCATTTATCCTGAGGCAGAATATGTTGAATTCAGTCTCCTCTGATGAAAGATTTGGATTGTATTCCATCAACACTGTCAGTATTACAGACATCCATGGCAGATAG 2511 0.3951 MEKKHISIMGFRRCTNTSVFIILSCCLLHVVAISSSQFIKDPRTLNSNNGNFTLGFFSIENTTNRYWGIWCKTKDTVIWVANRNQPLKDSSGVVTISEDGNLVVMDGQKHVMWSSNVSNITSSNSTFQLSDYGSLVLLENITGNTIWESFQHPTNTWLPHLELSSNKITGEKVGLTSWKSPSDPSIGSFSLSIERFNIPEIFIWNDNQPYWRSGPWNGRVFLGVPGMEAMYLNGFHVENNGDGTVAGYFTVDELGLTVLTLNWQGLLQEDNWDDKKEEWQVTWTSRKSDCDVYGICGAFASCNSQTSPICTCLKGFEPRNIEEWNRQNWTNGCISRTPLQCERANHQSRSVDSNKPDGFLRLEMVKVPDFAEGSSVTQDQCQSQCLENCTCIAYSYDAVIGCMTWSGSLIDIQQFTLGGSDLYIRVAYTELGKGRNIIVIITIIVIIGVLLFLTCAYVIWRRALHLAMKKKLGFFRLNKGTTSEENVSDNIIGEFSQAKLQELLLFNFEKLATATNNFQSSNKLGQGGFGPVYKGELRDGKKIAIKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLIYEYMPNRSLDAYLFDPSNNKHLDWRKRFIIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELIPKISDFGMARIFGGSEDQANTQKIVGTYGYMSPEYAMHGVFSEKSDVFSFGVLLLEIVSGRQNSSFYDPENSQTILGFAWIKWTEDNIVTLIDSGIYDSSLHKDILRCIHIGLLCVQEFAPDRPTMATVISMLNSEIVNLPPPREPAFILRQNMLNSVSSDERFGLYSINTVSITDIHGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1819 836 CDD B_lectin 36 153 IPR001480 -
Apr4g1819 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 26 834 - -
Apr4g1819 836 PIRSF SRK 5 836 IPR024171 GO:0004674
Apr4g1819 836 Pfam D-mannose binding lectin 76 179 IPR001480 -
Apr4g1819 836 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Apr4g1819 836 ProSiteProfiles Protein kinase domain profile. 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1819 836 ProSiteProfiles PAN/Apple domain profile. 341 427 IPR003609 -
Apr4g1819 836 SMART blect_4 36 153 IPR001480 -
Apr4g1819 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Apr4g1819 836 Gene3D Phosphorylase Kinase; domain 1 479 593 - -
Apr4g1819 836 Pfam PAN-like domain 354 412 IPR003609 -
Apr4g1819 836 SMART ntp_6 354 426 IPR003609 -
Apr4g1819 836 Gene3D Transferase(Phosphotransferase) domain 1 594 795 - -
Apr4g1819 836 CDD PAN_AP_plant 337 427 - -
Apr4g1819 836 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Apr4g1819 836 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Apr4g1819 836 CDD STKc_IRAK 524 790 - -
Apr4g1819 836 Gene3D - 30 151 IPR036426 -
Apr4g1819 836 SMART serkin_6 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1819 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 184 IPR036426 -
Apr4g1819 836 Pfam Protein tyrosine and serine/threonine kinase 520 788 IPR001245 GO:0004672|GO:0006468
Apr4g1819 836 SUPERFAMILY Protein kinase-like (PK-like) 506 817 IPR011009 -
Apr4g1819 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1819 Apr-Chr4 25092586 25095648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1819 429 807 Receptor kinase-like Gene Family AT4G05200 51.571 1.14e-129 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr4g1819 PK_Tyr_Ser-Thr 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1819 - - mtr:MTR_7g056430 1107.82