Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1796 ATGGGCAGGATTGAACTGGTTGAGAAAGTTGTAGTTGCACCTGAGCAGCCAACACCTTGCAAGAGAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTATACCAAGACTCTGCATCCTTTTTTGATCCTCCAAGCAGCCAAATGAGCTTTAATGAGATTTGTAGCAAATTATACAGTGCACTCAGTAAAATGCTTGTGCATTATGACTTTATGGCTGGTCGGCTAGTGCCCAGTTTGGAGGAGAATCATCGGTTTGAAATAGACTGTAATGGTGCTGGTATTGTGGTTGTAGCTGCAAGAACTGAAAGAAAACTGAGTGAATTTGGTGTGATCTCTGCACCTAATCCAGAGTTAAGGGAATTGGTTGTTTTCTTGGATGCAGAGGGTGAACATGTAACTGACCTGAAAGAAAAACCCCTTGTATCCTTGCAGTTAACACAGTTTGGTTGTGGAAGTTTGGCACTTGCTTCTCACTACAACCACTGCACACTGGATGGTATTGCAGTCAGAGATTTTGAGGTGAATTTGGCTGCATTAACACGAGGTAATGACCTCATAATAGTACCTAATGCAGATAGAAAACTGCTAAGAGCTCGCAACCCTCCAAAGATAAATCATCCACATTTTGAGTATTCAAAATCTACTGGCATACAGAACTTGTTTACTGTCCGAGGCACAAGTGGAATCAATGTCAGACAGTCCGTGACAGAAAATCAAATTCATTTGCTTTATTTATCACCTCAAAGAATTTCCAGCTTCAAAATGAAAGCTCTGAAGGACAACAACTTAAAGAATATCTCCACTTTTCAAGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGTATTGCAACAAAGATGGCAGAGGATAAAGTATCAACAATGTTGTTTCCAGTAGATGTTAGGAAAAGGGTTGTTCCTGAGCTTCCAGATCAGTTTGCAGGCAATGCATTGGTTCCTGGTTTTGCAAGAGCAACTGTGAGGGAACTCCAGGAACTAGAAGATGCTTGTCACATAAGGAAAGTACAAGAAGGGATTGAAAGATTGGATGATGAGTATATTAAGTCAGGTATAGATTGGTTGGAGGTGAATAGAGGGGCACCTTGTAGGGATTATAGTTTTTCTTTGGTGTCATGGTGGAGACTTGGACTTGAGGAGCAACTTTTTGCATGGGGTAGACTAAAATGTGCCACTCCGCTTGCAGTTAAGCCTGGTTTGGTCATGCTCTTGCCAGGGCCACAAGATCAAGGTGGTCTTAGTATATGCCTAGATTTACCTGAGGATCAAATGCAGGAGTTTTCTAGGATAATGCTGGAAATTTAG 1323 0.4135 MGRIELVEKVVVAPEQPTPCKRMFLSNIDLSLVVYQDSASFFDPPSSQMSFNEICSKLYSALSKMLVHYDFMAGRLVPSLEENHRFEIDCNGAGIVVVAARTERKLSEFGVISAPNPELRELVVFLDAEGEHVTDLKEKPLVSLQLTQFGCGSLALASHYNHCTLDGIAVRDFEVNLAALTRGNDLIIVPNADRKLLRARNPPKINHPHFEYSKSTGIQNLFTVRGTSGINVRQSVTENQIHLLYLSPQRISSFKMKALKDNNLKNISTFQVVAAKIWKARSIATKMAEDKVSTMLFPVDVRKRVVPELPDQFAGNALVPGFARATVRELQELEDACHIRKVQEGIERLDDEYIKSGIDWLEVNRGAPCRDYSFSLVSWWRLGLEEQLFAWGRLKCATPLAVKPGLVMLLPGPQDQGGLSICLDLPEDQMQEFSRIMLEI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1796 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 438 - -
Apr4g1796 440 Gene3D - 233 440 IPR023213 -
Apr4g1796 440 Gene3D - 2 214 IPR023213 -
Apr4g1796 440 Pfam Transferase family 4 434 - -
Apr4g1796 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1796 Apr-Chr4 24736283 24737950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1796 3 440 Monolignol Biosynthesis Gene Families AT5G48930 29.241 2.48e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1796 K15400 - gmx:100801822 753.821