Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1778 ATGGCTTTGAATGAATTTTCACCTGTGATTAAACAAGAGGACAATGAATTCCTCACAGCCATAGTTCCTAGCTGTGGTCTTATCTATTCAGCAGTTTTGAATGCTGCAATTGAACTAAACATATTTGAGATCATAGGTAAGGCAACCCCACCTGGTGTCTCAGCCTCTGAAATCGCTTCTCAGCTTCCAAAACAGCACCCAGAATTGCCTAGAAGGCTTGATCGCATGCTGTGTTTGCTTGCTAGTCACTCTCTTCTTACCTGTTCCACACGCCCCAATCAAGCTTTTGGGGTTGAAAGACTCTATCAATTATCAAGGGCTGGTAAATACTTTGTCAATGATCCGAATAGAGGCTCCTTAACTTTATTGCCAATATTTCTTGCTCACCAAACTCTCGTGGATGTTTTCCTCAATTATAAGGAGGTCCTTTTAGATTGTGACAATGACATATACAGTAAAGTCAATGGAATGCCTTTTTATCAAAGCATACAGAGAGATTTGTCATTGAATCATATTTTTAATAAATCGATAGCCGATCTATGCAAAGTGGAGATAGGGAAGATACTCGAAATATATGATGGATTTGAAGGAATATCATCGTTGGTTGATGTGGGAGGTGGCATTGGACAAAATTTGAATGTGATTATCTCCAAGTATCCTTCAATTAAGGGTATCAATTTTGATCGACCCCAAGTGATACAAAATGCTCCAGCTTATCCAGGGATAGAACATGTTGGAGGAGATATGTTTGAGAGTGTTCCAAAAGGTGATGCAATTATATTAAAGGCTGTTTGTCACAATTGGCCTGATGAAAAATGCTTAAAAGTTTTGACTAATTGCTATGAAGCTCTGCCCCAAAATGGTAAGGTGATTGTTGTGGACTTCATAATGTTTGAGACAATTCAATCATCTGATGCAGAAAAGTTTGCTTCCAGTATAGACAACCTTATGTTTATTTTTGGTGGGAGAGAAAGAACTGAGAAGGAATTTGAGAATCTGTGTAAAGACTCTGGCTTTTCTAGTTTTAAAGTTATTTGCCGTGCTTTCTCAACTTTAGGAGTGATGGAATTTTATAAAGCATAA 1083 0.3795 MALNEFSPVIKQEDNEFLTAIVPSCGLIYSAVLNAAIELNIFEIIGKATPPGVSASEIASQLPKQHPELPRRLDRMLCLLASHSLLTCSTRPNQAFGVERLYQLSRAGKYFVNDPNRGSLTLLPIFLAHQTLVDVFLNYKEVLLDCDNDIYSKVNGMPFYQSIQRDLSLNHIFNKSIADLCKVEIGKILEIYDGFEGISSLVDVGGGIGQNLNVIISKYPSIKGINFDRPQVIQNAPAYPGIEHVGGDMFESVPKGDAIILKAVCHNWPDEKCLKVLTNCYEALPQNGKVIVVDFIMFETIQSSDAEKFASSIDNLMFIFGGRERTEKEFENLCKDSGFSSFKVICRAFSTLGVMEFYKA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1778 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 357 IPR029063 -
Apr4g1778 360 Gene3D Vaccinia Virus protein VP39 170 348 IPR029063 -
Apr4g1778 360 Pfam O-methyltransferase domain 140 340 IPR001077 GO:0008171
Apr4g1778 360 Gene3D - 28 188 IPR036388 -
Apr4g1778 360 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 22 359 - -
Apr4g1778 360 PIRSF O-mtase 2 359 IPR016461 GO:0008168
Apr4g1778 360 SUPERFAMILY "Winged helix" DNA-binding domain 14 115 IPR036390 -
Apr4g1778 360 Pfam Dimerisation domain 32 81 IPR012967 GO:0046983
Apr4g1778 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Apr4g1778 360 PANTHER O-METHYLTRANSFERASE 22 359 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1778 Apr-Chr4 24256555 24259048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1778 2 349 Monolignol Biosynthesis Gene Families AT5G54160 45.714 6.25e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1778 - - gmx:100784030 491.115