Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1772 ATGAAGTCGAAATACTCATCATCATGGGTTCTCTGCACCATTCTCTGCCTCTCAACACTATCCCACAGCCTCTCGGATCCAAGAATCTCGGAGGCAGGGCTCTACTGCGGCAAAAACAGAGCCCCACTGAAAGCGAACTACATCCCAAGCTTCATCAAGGAAATGGAAACCCTCTCTCAGCAAGTAACAGACCACAACTGGGGCTCCCACTTCATCAACATCTCAGCCATTCCCATCTTCGGCTTAGCCCAATGTTTCCACGACCTCTCCCACACCGATTGCCTCCTCTGCTACGCCGCAAGTCGCACCAAGCTCCCTCGCTGCCTCCCTTCCGTCTCCGCTCGCATCTACCTCGACGGTTGCTTCCTCCGCTACGACAACTACAACTTCTACTCCGAAAGCACCGACCCTTCAAGAGACACTGTCAACTGCACCTCCCAGTACGGCATCGTTTCTGATGCAGCTCAGAGGGTGGAGCTTCAAATGAGTGTTGGAAGACTTGTTGATAGTGTCACCGCGCTGGCTGTGGCTAAAGCTCGTGGTTTTGCTGTTGGGGATGTCAAAGGGGTTTATGCGTTGGCTCAGTGCTGGAACACTGTTGGGAGTGAGGGGTGTAGAGAGTGCTTGAGGAAAGCTGCAAAGGAGGTGAAAACGTGCTTGCCAAAAAGAGAAGGGAGGGCCTTGAATGCTGGGTGTTATTTGAGGTATTCTACTCACAAGTTTTATAATGAAGAAGATGCTGCACGTGGTGGAAAAGGGTCCTTTAGAAGACGAGGAGTTATAATAGCTGAAGTGTTAGCAGCAGCTGCAGTTTTAATGCTCGCTCTCTCTGCCTCTTATGCAGCCTTCACAAGATTGTCAAAGATTAAAAGAGAAAACAAAAATCTTGGTCCGATTTCCTCTTCCATAAGCAAATCTAGGTTGAATTACAAATACGAGACTCTTGAGAAGGCCACAGATTATTTCAACTCTTCCAGAAAAATTGGACAAGGAGGGGCTGGTTCTGTTTTCAAAGGTATTCTTCCAAGTGGGAAAGTTGTTGCCGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAATGAAGTGAATTTGATTAGCGGAATTGAACACAAGAACCTTGTCAAACTATTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTCCTTGTGTACGAGTACTTACCCAAAAAGAGTTTGGACCAATTTATCTTTGAAAAGAACAGAGCTCAGATTCTAAATTGGAAGAAGCGGTTTAATATCATTCTTGGAACAGCTGAAGGGCTTGCATATCTTCATGAAGGCACTAAAATAAGAATCATCCATAGAGACATCAAAAGCAGCAATATTCTTCTGGACGAGAATCTCACTCCTAAGATTGCAGATTTTGGCCTTGCCAGGTGTTTTGGTGCTGATAAGTCCCATTTGAGCACTGGAATTGCTGGAACATTAGGTTACATGGCTCCAGAGTACCTAATTCGAGGGCAACTTACAGATAAAGCTGATGTATATAGTTATGGAGTACTTGTTCTGGAGATCGTAAGTGGCAGGAGGAATAACGTCTTCAGAGAGGACTCTGGCTCGCTACTACAAACTGTTTGGAAACTTTACCGATCAAACACATTAAATGAAGCTGTGGATTCTTGCTTGGGAGATGATTTTCCTGCAACTGAGGCATCAAGGGTGTTTCGGATTGCATTGCTTTGCACACAAGCTTCTGCTTCCCTGAGGCCATCCATGTCGCACGTTGTTTTCATGTTAAGTAATTCAAATGTGGATGTTCCTACACCAAATCAACCACCATTTTTGAACACTGGAGTGCTTGACTCAGACAGCTCCAGTAAGTCTTATAGCACAAGCAGCTTTATATCCAATGCCTTAAAGAAGATAGGAGTGTCCTACAGCTACTCGGAGTCCTCTAGTTCACGCAACTCAGAGGGGCCATCAAGAAGTGCAGAATCGATTGTCCAAGGTTGA 1986 0.4567 MKSKYSSSWVLCTILCLSTLSHSLSDPRISEAGLYCGKNRAPLKANYIPSFIKEMETLSQQVTDHNWGSHFINISAIPIFGLAQCFHDLSHTDCLLCYAASRTKLPRCLPSVSARIYLDGCFLRYDNYNFYSESTDPSRDTVNCTSQYGIVSDAAQRVELQMSVGRLVDSVTALAVAKARGFAVGDVKGVYALAQCWNTVGSEGCRECLRKAAKEVKTCLPKREGRALNAGCYLRYSTHKFYNEEDAARGGKGSFRRRGVIIAEVLAAAAVLMLALSASYAAFTRLSKIKRENKNLGPISSSISKSRLNYKYETLEKATDYFNSSRKIGQGGAGSVFKGILPSGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRAQILNWKKRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNILLDENLTPKIADFGLARCFGADKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSYGVLVLEIVSGRRNNVFREDSGSLLQTVWKLYRSNTLNEAVDSCLGDDFPATEASRVFRIALLCTQASASLRPSMSHVVFMLSNSNVDVPTPNQPPFLNTGVLDSDSSSKSYSTSSFISNALKKIGVSYSYSESSSSRNSEGPSRSAESIVQG* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1772 661 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Apr4g1772 661 Gene3D Transferase(Phosphotransferase) domain 1 398 599 - -
Apr4g1772 661 ProSiteProfiles Protein kinase domain profile. 322 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1772 661 Pfam Protein kinase domain 323 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1772 661 Pfam Salt stress response/antifungal 164 238 IPR002902 -
Apr4g1772 661 Pfam Salt stress response/antifungal 52 128 IPR002902 -
Apr4g1772 661 CDD STKc_IRAK 328 590 - -
Apr4g1772 661 ProSiteProfiles Gnk2-homologous domain profile. 139 241 IPR002902 -
Apr4g1772 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 19 654 - -
Apr4g1772 661 SMART serkin_6 322 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1772 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 19 654 - -
Apr4g1772 661 Gene3D - 144 241 IPR038408 -
Apr4g1772 661 Gene3D - 33 130 IPR038408 -
Apr4g1772 661 Gene3D Phosphorylase Kinase; domain 1 282 397 - -
Apr4g1772 661 MobiDBLite consensus disorder prediction 640 661 - -
Apr4g1772 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Apr4g1772 661 SUPERFAMILY Protein kinase-like (PK-like) 305 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1772 Apr-Chr4 24010790 24013973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1772 10 487 Receptor kinase-like Gene Family AT5G40380 55.602 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr4g1772 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1772 - - gmx:100790404 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1772 4 24010790 24013973 Apr4g1772 4 24010790 24013973 ECH
Apr4g1772 4 24010790 24013973 Apr6g0044 6 415697 418571 ECH
Apr7g1658 7 23736529 23744497 Apr4g1772 4 24010790 24013973 ECH
Apr3g0768 3 20250590 20253679 Apr4g1772 4 24010790 24013973 ECH